Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPS3AP61247 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPS3AP61247 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.11■□□□□ 0.17
RPS3AP61247 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS3AP61247 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS3AP61247 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPS3AP61247 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPS3AP61247 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.11■□□□□ 0.17
RPS3AP61247 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPS3AP61247 AC112698.1-201ENST00000510299 916 ntBASIC16.11■□□□□ 0.17
RPS3AP61247 DUTP2-201ENST00000519164 463 ntBASIC16.11■□□□□ 0.17
RPS3AP61247 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.11■□□□□ 0.17
RPS3AP61247 AC099336.1-202ENST00000602961 463 ntBASIC16.11■□□□□ 0.17
RPS3AP61247 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.11■□□□□ 0.17
RPS3AP61247 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
RPS3AP61247 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.11■□□□□ 0.17
RPS3AP61247 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPS3AP61247 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.11■□□□□ 0.17
RPS3AP61247 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS3AP61247 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPS3AP61247 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RPS3AP61247 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPS3AP61247 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPS3AP61247 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.11■□□□□ 0.17
RPS3AP61247 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS3AP61247 TCAF2P1-201ENST00000291129 2421 ntBASIC16.1■□□□□ 0.17
RPS3AP61247 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS3AP61247 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS3AP61247 NSUN5P1-202ENST00000421140 1535 ntBASIC16.1■□□□□ 0.17
RPS3AP61247 NSUN5P2-203ENST00000457352 1529 ntBASIC16.1■□□□□ 0.17
RPS3AP61247 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS3AP61247 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS3AP61247 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.1■□□□□ 0.17
RPS3AP61247 AC007950.2-201ENST00000615045 2347 ntBASIC16.1■□□□□ 0.17
RPS3AP61247 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS3AP61247 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RPS3AP61247 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS3AP61247 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.1■□□□□ 0.17
RPS3AP61247 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.1■□□□□ 0.17
RPS3AP61247 KRT126P-201ENST00000549467 1181 ntBASIC16.1■□□□□ 0.17
RPS3AP61247 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RPS3AP61247 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS3AP61247 AL691432.3-201ENST00000621860 400 ntBASIC16.1■□□□□ 0.17
RPS3AP61247 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS3AP61247 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS3AP61247 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS3AP61247 HYMAI-201ENST00000635591 3347 ntBASIC16.1■□□□□ 0.17
RPS3AP61247 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
RPS3AP61247 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS3AP61247 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS3AP61247 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPS3AP61247 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS3AP61247 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.1■□□□□ 0.17
RPS3AP61247 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS3AP61247 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS3AP61247 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPS3AP61247 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.09■□□□□ 0.17
RPS3AP61247 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS3AP61247 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS3AP61247 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS3AP61247 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RPS3AP61247 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RPS3AP61247 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS3AP61247 AC132938.6-201ENST00000623828 1655 ntBASIC16.09■□□□□ 0.17
RPS3AP61247 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RPS3AP61247 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS3AP61247 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS3AP61247 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS3AP61247 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
RPS3AP61247 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS3AP61247 POM121L3P-201ENST00000419331 1163 ntBASIC16.09■□□□□ 0.17
RPS3AP61247 IGHV3-47-201ENST00000425060 335 ntBASIC16.09■□□□□ 0.17
RPS3AP61247 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RPS3AP61247 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.09■□□□□ 0.17
RPS3AP61247 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.09■□□□□ 0.17
RPS3AP61247 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.09■□□□□ 0.17
RPS3AP61247 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.09■□□□□ 0.17
RPS3AP61247 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.09■□□□□ 0.17
RPS3AP61247 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS3AP61247 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS3AP61247 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.09■□□□□ 0.17
RPS3AP61247 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RPS3AP61247 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS3AP61247 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS3AP61247 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RPS3AP61247 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RPS3AP61247 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.09■□□□□ 0.17
RPS3AP61247 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.09■□□□□ 0.17
RPS3AP61247 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.09■□□□□ 0.17
RPS3AP61247 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RPS3AP61247 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.09■□□□□ 0.17
RPS3AP61247 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
RPS3AP61247 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RPS3AP61247 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.09■□□□□ 0.17
RPS3AP61247 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RPS3AP61247 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS3AP61247 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPS3AP61247 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RPS3AP61247 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.08■□□□□ 0.17
RPS3AP61247 AC133963.1-201ENST00000504166 1679 ntBASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms