Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 AC022211.2-201ENST00000585075 2527 ntBASIC19.59■□□□□ 0.73
CHMP4BP1P59074 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 AL049757.1-201ENST00000616842 1596 ntBASIC19.59■□□□□ 0.73
CHMP4BP1P59074 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 PRYP5-201ENST00000451909 266 ntBASIC19.59■□□□□ 0.73
CHMP4BP1P59074 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 AL589182.2-201ENST00000619332 1049 ntBASIC19.59■□□□□ 0.73
CHMP4BP1P59074 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.59■□□□□ 0.73
CHMP4BP1P59074 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.58■□□□□ 0.73
CHMP4BP1P59074 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.58■□□□□ 0.73
CHMP4BP1P59074 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.58■□□□□ 0.73
CHMP4BP1P59074 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.58■□□□□ 0.73
CHMP4BP1P59074 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CHMP4BP1P59074 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.58■□□□□ 0.73
CHMP4BP1P59074 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
CHMP4BP1P59074 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP4BP1P59074 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 AC004832.2-201ENST00000426397 482 ntBASIC19.58■□□□□ 0.72
CHMP4BP1P59074 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CHMP4BP1P59074 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 SIGLEC30P-201ENST00000455569 941 ntBASIC19.57■□□□□ 0.72
CHMP4BP1P59074 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 MTDHP5-201ENST00000598980 586 ntBASIC19.57■□□□□ 0.72
CHMP4BP1P59074 AC004706.3-202ENST00000621574 984 ntBASIC19.57■□□□□ 0.72
CHMP4BP1P59074 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP4BP1P59074 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 AL353593.2-201ENST00000602529 1483 ntBASIC19.56■□□□□ 0.72
CHMP4BP1P59074 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms