Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
SUMO3P55854 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
SUMO3P55854 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SUMO3P55854 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.47■□□□□ 0.07
SUMO3P55854 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.47■□□□□ 0.07
SUMO3P55854 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.47■□□□□ 0.07
SUMO3P55854 AL121894.2-201ENST00000602977 491 ntBASIC15.47■□□□□ 0.07
SUMO3P55854 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.47■□□□□ 0.07
SUMO3P55854 AC116407.3-201ENST00000623905 1129 ntBASIC15.47■□□□□ 0.07
SUMO3P55854 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
SUMO3P55854 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SUMO3P55854 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SUMO3P55854 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SUMO3P55854 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SUMO3P55854 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.47■□□□□ 0.07
SUMO3P55854 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SUMO3P55854 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
SUMO3P55854 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SUMO3P55854 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SUMO3P55854 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
SUMO3P55854 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SUMO3P55854 AC129492.6-201ENST00000611383 1305 ntBASIC15.46■□□□□ 0.07
SUMO3P55854 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.46■□□□□ 0.07
SUMO3P55854 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.46■□□□□ 0.07
SUMO3P55854 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SUMO3P55854 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SUMO3P55854 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.46■□□□□ 0.07
SUMO3P55854 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SUMO3P55854 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SUMO3P55854 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SUMO3P55854 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SUMO3P55854 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SUMO3P55854 PRSS29P-201ENST00000440800 595 ntBASIC15.46■□□□□ 0.07
SUMO3P55854 AC108073.2-201ENST00000464002 357 ntBASIC15.46■□□□□ 0.07
SUMO3P55854 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.46■□□□□ 0.07
SUMO3P55854 AC010654.1-201ENST00000615722 808 ntBASIC15.46■□□□□ 0.07
SUMO3P55854 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.46■□□□□ 0.07
SUMO3P55854 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.46■□□□□ 0.07
SUMO3P55854 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SUMO3P55854 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SUMO3P55854 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SUMO3P55854 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SUMO3P55854 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.46■□□□□ 0.07
SUMO3P55854 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.46■□□□□ 0.07
SUMO3P55854 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.46■□□□□ 0.07
SUMO3P55854 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SUMO3P55854 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.46■□□□□ 0.06
SUMO3P55854 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SUMO3P55854 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SUMO3P55854 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.46■□□□□ 0.06
SUMO3P55854 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.46■□□□□ 0.06
SUMO3P55854 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SUMO3P55854 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SUMO3P55854 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SUMO3P55854 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
SUMO3P55854 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.45■□□□□ 0.06
SUMO3P55854 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SUMO3P55854 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SUMO3P55854 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.45■□□□□ 0.06
SUMO3P55854 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SUMO3P55854 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SUMO3P55854 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.45■□□□□ 0.06
SUMO3P55854 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SUMO3P55854 AC092068.3-201ENST00000587894 2016 ntBASIC15.45■□□□□ 0.06
SUMO3P55854 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.45■□□□□ 0.06
SUMO3P55854 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SUMO3P55854 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.45■□□□□ 0.06
SUMO3P55854 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SUMO3P55854 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.45■□□□□ 0.06
SUMO3P55854 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
SUMO3P55854 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
SUMO3P55854 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.45■□□□□ 0.06
SUMO3P55854 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.45■□□□□ 0.06
SUMO3P55854 AC108751.1-201ENST00000490852 363 ntBASIC15.45■□□□□ 0.06
SUMO3P55854 SLC25A6P2-201ENST00000497974 877 ntBASIC15.45■□□□□ 0.06
SUMO3P55854 IGHV3-22-201ENST00000520721 359 ntBASIC15.45■□□□□ 0.06
SUMO3P55854 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.45■□□□□ 0.06
SUMO3P55854 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.45■□□□□ 0.06
SUMO3P55854 AC091167.2-201ENST00000579581 588 ntBASIC15.45■□□□□ 0.06
SUMO3P55854 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SUMO3P55854 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SUMO3P55854 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
SUMO3P55854 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.45■□□□□ 0.06
SUMO3P55854 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SUMO3P55854 REXO1L3P-201ENST00000622202 1288 ntBASIC15.45■□□□□ 0.06
SUMO3P55854 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.45■□□□□ 0.06
SUMO3P55854 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.45■□□□□ 0.06
SUMO3P55854 OR6D1P-203ENST00000641209 4860 ntBASIC15.45■□□□□ 0.06
SUMO3P55854 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SUMO3P55854 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SUMO3P55854 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SUMO3P55854 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SUMO3P55854 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SUMO3P55854 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SUMO3P55854 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SUMO3P55854 PRORSD1P-202ENST00000563365 2154 ntBASIC15.45■□□□□ 0.06
SUMO3P55854 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.45■□□□□ 0.06
SUMO3P55854 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.45■□□□□ 0.06
SUMO3P55854 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
SUMO3P55854 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms