Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH11P55287 AC093525.9-201ENST00000624961 1746 ntBASIC15.72■□□□□ 0.11
CDH11P55287 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.72■□□□□ 0.11
CDH11P55287 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDH11P55287 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH11P55287 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CDH11P55287 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH11P55287 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH11P55287 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
CDH11P55287 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH11P55287 AC004870.1-201ENST00000315132 882 ntBASIC15.72■□□□□ 0.11
CDH11P55287 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH11P55287 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH11P55287 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CDH11P55287 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDH11P55287 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CDH11P55287 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH11P55287 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.72■□□□□ 0.11
CDH11P55287 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.72■□□□□ 0.11
CDH11P55287 AC026396.1-201ENST00000419388 421 ntBASIC15.72■□□□□ 0.11
CDH11P55287 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH11P55287 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH11P55287 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH11P55287 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH11P55287 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH11P55287 AL121772.3-201ENST00000610840 674 ntBASIC15.72■□□□□ 0.11
CDH11P55287 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH11P55287 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CDH11P55287 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CDH11P55287 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH11P55287 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH11P55287 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH11P55287 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH11P55287 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH11P55287 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH11P55287 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH11P55287 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CDH11P55287 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH11P55287 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH11P55287 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH11P55287 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH11P55287 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH11P55287 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH11P55287 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH11P55287 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CDH11P55287 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CDH11P55287 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH11P55287 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH11P55287 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH11P55287 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH11P55287 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH11P55287 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
CDH11P55287 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH11P55287 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH11P55287 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH11P55287 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH11P55287 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH11P55287 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH11P55287 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH11P55287 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
CDH11P55287 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.71■□□□□ 0.11
CDH11P55287 FOSL1P1-201ENST00000511041 816 ntBASIC15.71■□□□□ 0.11
CDH11P55287 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH11P55287 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH11P55287 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH11P55287 RN7SL510P-201ENST00000581311 263 ntBASIC15.71■□□□□ 0.11
CDH11P55287 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH11P55287 LINC01711-201ENST00000598340 967 ntBASIC15.71■□□□□ 0.11
CDH11P55287 AC138894.3-201ENST00000603787 634 ntBASIC15.71■□□□□ 0.11
CDH11P55287 IFNL4P1-201ENST00000607083 540 ntBASIC15.71■□□□□ 0.11
CDH11P55287 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH11P55287 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH11P55287 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH11P55287 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH11P55287 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH11P55287 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH11P55287 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CDH11P55287 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH11P55287 AC233702.3-201ENST00000578656 1387 ntBASIC15.71■□□□□ 0.11
CDH11P55287 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH11P55287 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH11P55287 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
CDH11P55287 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH11P55287 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH11P55287 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CDH11P55287 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH11P55287 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH11P55287 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH11P55287 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH11P55287 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH11P55287 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH11P55287 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH11P55287 AC092053.1-201ENST00000605787 1936 ntBASIC15.7■□□□□ 0.1
CDH11P55287 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CDH11P55287 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH11P55287 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH11P55287 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CDH11P55287 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.7■□□□□ 0.1
CDH11P55287 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH11P55287 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms