Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 AL023284.2-201ENST00000405850 579 ntBASIC16.28■□□□□ 0.2
NR1H2P55055 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NR1H2P55055 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.28■□□□□ 0.2
NR1H2P55055 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.28■□□□□ 0.2
NR1H2P55055 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.28■□□□□ 0.2
NR1H2P55055 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.28■□□□□ 0.2
NR1H2P55055 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.28■□□□□ 0.2
NR1H2P55055 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.28■□□□□ 0.2
NR1H2P55055 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NR1H2P55055 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.28■□□□□ 0.2
NR1H2P55055 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.28■□□□□ 0.2
NR1H2P55055 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
NR1H2P55055 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.28■□□□□ 0.2
NR1H2P55055 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NR1H2P55055 AL662844.4-201ENST00000606367 2838 ntBASIC16.27■□□□□ 0.2
NR1H2P55055 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.27■□□□□ 0.2
NR1H2P55055 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H2P55055 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H2P55055 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NR1H2P55055 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H2P55055 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H2P55055 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H2P55055 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.27■□□□□ 0.2
NR1H2P55055 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.27■□□□□ 0.2
NR1H2P55055 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H2P55055 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H2P55055 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H2P55055 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H2P55055 AL365203.3-201ENST00000609742 2057 ntBASIC16.27■□□□□ 0.2
NR1H2P55055 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H2P55055 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H2P55055 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.27■□□□□ 0.2
NR1H2P55055 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
NR1H2P55055 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.27■□□□□ 0.2
NR1H2P55055 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.27■□□□□ 0.2
NR1H2P55055 RASA4DP-201ENST00000460726 1199 ntBASIC16.27■□□□□ 0.2
NR1H2P55055 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H2P55055 AC083849.1-201ENST00000615227 514 ntBASIC16.27■□□□□ 0.2
NR1H2P55055 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H2P55055 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H2P55055 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NR1H2P55055 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NR1H2P55055 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NR1H2P55055 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NR1H2P55055 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
NR1H2P55055 AC092171.3-201ENST00000610122 2651 ntBASIC16.27■□□□□ 0.19
NR1H2P55055 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NR1H2P55055 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.27■□□□□ 0.19
NR1H2P55055 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NR1H2P55055 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NR1H2P55055 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
NR1H2P55055 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NR1H2P55055 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NR1H2P55055 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NR1H2P55055 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
NR1H2P55055 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
NR1H2P55055 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.19
NR1H2P55055 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NR1H2P55055 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
NR1H2P55055 LINC02228-204ENST00000642115 2962 ntBASIC16.26■□□□□ 0.19
NR1H2P55055 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H2P55055 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H2P55055 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.26■□□□□ 0.19
NR1H2P55055 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H2P55055 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.26■□□□□ 0.19
NR1H2P55055 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H2P55055 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.26■□□□□ 0.19
NR1H2P55055 AC100803.2-201ENST00000562459 1963 ntBASIC16.26■□□□□ 0.19
NR1H2P55055 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H2P55055 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.26■□□□□ 0.19
NR1H2P55055 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H2P55055 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NR1H2P55055 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H2P55055 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.26■□□□□ 0.19
NR1H2P55055 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H2P55055 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H2P55055 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H2P55055 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.26■□□□□ 0.19
NR1H2P55055 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H2P55055 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H2P55055 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NR1H2P55055 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.26■□□□□ 0.19
NR1H2P55055 SPDYE15P-201ENST00000424157 909 ntBASIC16.26■□□□□ 0.19
NR1H2P55055 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.26■□□□□ 0.19
NR1H2P55055 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms