Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF4P48230 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF4P48230 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF4P48230 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.24■□□□□ 0.67
TM4SF4P48230 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.24■□□□□ 0.67
TM4SF4P48230 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.24■□□□□ 0.67
TM4SF4P48230 MYCLP2-201ENST00000449268 967 ntBASIC19.24■□□□□ 0.67
TM4SF4P48230 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF4P48230 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.24■□□□□ 0.67
TM4SF4P48230 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF4P48230 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TM4SF4P48230 AL512361.1-201ENST00000554200 418 ntBASIC19.24■□□□□ 0.67
TM4SF4P48230 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC19.24■□□□□ 0.67
TM4SF4P48230 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC19.24■□□□□ 0.67
TM4SF4P48230 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.24■□□□□ 0.67
TM4SF4P48230 CYP2A7P1-201ENST00000595391 815 ntBASIC19.24■□□□□ 0.67
TM4SF4P48230 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.24■□□□□ 0.67
TM4SF4P48230 MIR6787-201ENST00000616675 61 ntBASIC19.24■□□□□ 0.67
TM4SF4P48230 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.24■□□□□ 0.67
TM4SF4P48230 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.24■□□□□ 0.67
TM4SF4P48230 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF4P48230 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.24■□□□□ 0.67
TM4SF4P48230 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM4SF4P48230 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.23■□□□□ 0.67
TM4SF4P48230 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM4SF4P48230 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM4SF4P48230 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM4SF4P48230 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM4SF4P48230 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.23■□□□□ 0.67
TM4SF4P48230 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
TM4SF4P48230 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TM4SF4P48230 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TM4SF4P48230 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TM4SF4P48230 TMEM14DP-201ENST00000422205 345 ntBASIC19.23■□□□□ 0.67
TM4SF4P48230 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.23■□□□□ 0.67
TM4SF4P48230 MEP1AP4-201ENST00000423244 1087 ntBASIC19.23■□□□□ 0.67
TM4SF4P48230 ACTBP11-201ENST00000436287 1126 ntBASIC19.23■□□□□ 0.67
TM4SF4P48230 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.23■□□□□ 0.67
TM4SF4P48230 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM4SF4P48230 ELK1P1-201ENST00000485699 580 ntBASIC19.23■□□□□ 0.67
TM4SF4P48230 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM4SF4P48230 AC098859.1-201ENST00000502915 1238 ntBASIC19.23■□□□□ 0.67
TM4SF4P48230 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TM4SF4P48230 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TM4SF4P48230 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.23■□□□□ 0.67
TM4SF4P48230 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.23■□□□□ 0.67
TM4SF4P48230 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.23■□□□□ 0.67
TM4SF4P48230 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.23■□□□□ 0.67
TM4SF4P48230 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
TM4SF4P48230 SRD5A3P1-201ENST00000603021 949 ntBASIC19.23■□□□□ 0.67
TM4SF4P48230 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.23■□□□□ 0.67
TM4SF4P48230 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.23■□□□□ 0.67
TM4SF4P48230 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM4SF4P48230 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TM4SF4P48230 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TM4SF4P48230 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM4SF4P48230 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.22■□□□□ 0.67
TM4SF4P48230 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.22■□□□□ 0.67
TM4SF4P48230 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
TM4SF4P48230 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TM4SF4P48230 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TM4SF4P48230 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TM4SF4P48230 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF4P48230 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF4P48230 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF4P48230 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF4P48230 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF4P48230 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.22■□□□□ 0.67
TM4SF4P48230 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.22■□□□□ 0.67
TM4SF4P48230 AC007389.4-201ENST00000454674 793 ntBASIC19.22■□□□□ 0.67
TM4SF4P48230 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TM4SF4P48230 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19.22■□□□□ 0.67
TM4SF4P48230 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC19.22■□□□□ 0.67
TM4SF4P48230 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.22■□□□□ 0.67
TM4SF4P48230 MIR4492-201ENST00000581627 80 ntBASIC19.22■□□□□ 0.67
TM4SF4P48230 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF4P48230 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF4P48230 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF4P48230 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TM4SF4P48230 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF4P48230 WIZP1-201ENST00000531444 2299 ntBASIC19.22■□□□□ 0.67
TM4SF4P48230 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.22■□□□□ 0.67
TM4SF4P48230 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF4P48230 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC19.22■□□□□ 0.67
TM4SF4P48230 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.22■□□□□ 0.67
TM4SF4P48230 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF4P48230 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF4P48230 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF4P48230 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF4P48230 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF4P48230 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF4P48230 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.21■□□□□ 0.67
TM4SF4P48230 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TM4SF4P48230 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF4P48230 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF4P48230 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TM4SF4P48230 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF4P48230 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF4P48230 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF4P48230 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms