Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A12P48065 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC6A12P48065 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SLC6A12P48065 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC6A12P48065 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
SLC6A12P48065 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
SLC6A12P48065 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A12P48065 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A12P48065 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC6A12P48065 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A12P48065 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A12P48065 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC6A12P48065 AC073621.1-201ENST00000392730 636 ntBASIC16.48■□□□□ 0.23
SLC6A12P48065 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC6A12P48065 AC018712.1-201ENST00000455767 687 ntBASIC16.48■□□□□ 0.23
SLC6A12P48065 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SLC6A12P48065 RNPS1P1-201ENST00000507437 918 ntBASIC16.48■□□□□ 0.23
SLC6A12P48065 AC073648.2-201ENST00000510116 352 ntBASIC16.48■□□□□ 0.23
SLC6A12P48065 OR7E14P-202ENST00000530490 1290 ntBASIC16.48■□□□□ 0.23
SLC6A12P48065 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.48■□□□□ 0.23
SLC6A12P48065 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC6A12P48065 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A12P48065 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SLC6A12P48065 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A12P48065 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A12P48065 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A12P48065 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A12P48065 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SLC6A12P48065 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC6A12P48065 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A12P48065 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SLC6A12P48065 OR6D1P-202ENST00000641007 5290 ntBASIC16.48■□□□□ 0.23
SLC6A12P48065 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A12P48065 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC6A12P48065 LINC00895-201ENST00000629028 1637 ntBASIC16.48■□□□□ 0.23
SLC6A12P48065 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC6A12P48065 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
SLC6A12P48065 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A12P48065 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC6A12P48065 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A12P48065 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A12P48065 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A12P48065 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC6A12P48065 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A12P48065 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A12P48065 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SLC6A12P48065 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A12P48065 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SLC6A12P48065 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A12P48065 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SLC6A12P48065 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SLC6A12P48065 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A12P48065 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC6A12P48065 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC6A12P48065 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC6A12P48065 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
SLC6A12P48065 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC6A12P48065 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.47■□□□□ 0.23
SLC6A12P48065 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC6A12P48065 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC6A12P48065 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.47■□□□□ 0.23
SLC6A12P48065 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC6A12P48065 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC6A12P48065 AF228730.7-201ENST00000641842 219 ntBASIC16.47■□□□□ 0.23
SLC6A12P48065 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SLC6A12P48065 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A12P48065 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A12P48065 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC6A12P48065 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A12P48065 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SLC6A12P48065 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A12P48065 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A12P48065 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A12P48065 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A12P48065 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A12P48065 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A12P48065 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC6A12P48065 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A12P48065 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC6A12P48065 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC6A12P48065 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC6A12P48065 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A12P48065 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A12P48065 AL391256.1-201ENST00000443260 1855 ntBASIC16.46■□□□□ 0.23
SLC6A12P48065 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A12P48065 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A12P48065 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A12P48065 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A12P48065 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A12P48065 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A12P48065 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SLC6A12P48065 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A12P48065 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A12P48065 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A12P48065 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A12P48065 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.46■□□□□ 0.23
SLC6A12P48065 HNRNPDP1-201ENST00000439535 754 ntBASIC16.46■□□□□ 0.23
SLC6A12P48065 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC6A12P48065 AC087163.2-201ENST00000457299 853 ntBASIC16.46■□□□□ 0.23
SLC6A12P48065 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms