Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 Z69720.1-201ENST00000601483 472 ntBASIC18.26■□□□□ 0.51
SSR1P43307 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.26■□□□□ 0.51
SSR1P43307 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SSR1P43307 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSR1P43307 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSR1P43307 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SSR1P43307 AC233702.3-201ENST00000578656 1387 ntBASIC18.26■□□□□ 0.51
SSR1P43307 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SSR1P43307 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSR1P43307 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SSR1P43307 AC093525.9-201ENST00000624961 1746 ntBASIC18.26■□□□□ 0.51
SSR1P43307 AL049757.1-201ENST00000616842 1596 ntBASIC18.25■□□□□ 0.51
SSR1P43307 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSR1P43307 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSR1P43307 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.25■□□□□ 0.51
SSR1P43307 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSR1P43307 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSR1P43307 AL121761.2-201ENST00000598007 1648 ntBASIC18.25■□□□□ 0.51
SSR1P43307 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSR1P43307 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.25■□□□□ 0.51
SSR1P43307 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.25■□□□□ 0.51
SSR1P43307 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SSR1P43307 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
SSR1P43307 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.25■□□□□ 0.51
SSR1P43307 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSR1P43307 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSR1P43307 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSR1P43307 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSR1P43307 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.25■□□□□ 0.51
SSR1P43307 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSR1P43307 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.25■□□□□ 0.51
SSR1P43307 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SSR1P43307 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.25■□□□□ 0.51
SSR1P43307 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSR1P43307 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
SSR1P43307 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSR1P43307 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SSR1P43307 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SSR1P43307 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SSR1P43307 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SSR1P43307 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SSR1P43307 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SSR1P43307 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.24■□□□□ 0.51
SSR1P43307 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SSR1P43307 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SSR1P43307 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.24■□□□□ 0.51
SSR1P43307 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SSR1P43307 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SSR1P43307 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SSR1P43307 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SSR1P43307 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.24■□□□□ 0.51
SSR1P43307 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.24■□□□□ 0.51
SSR1P43307 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SSR1P43307 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SSR1P43307 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.24■□□□□ 0.51
SSR1P43307 AC096582.2-201ENST00000510860 516 ntBASIC18.24■□□□□ 0.51
SSR1P43307 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.24■□□□□ 0.51
SSR1P43307 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.24■□□□□ 0.51
SSR1P43307 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
SSR1P43307 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.24■□□□□ 0.51
SSR1P43307 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SSR1P43307 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SSR1P43307 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
SSR1P43307 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SSR1P43307 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SSR1P43307 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SSR1P43307 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SSR1P43307 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SSR1P43307 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SSR1P43307 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SSR1P43307 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSR1P43307 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSR1P43307 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.23■□□□□ 0.51
SSR1P43307 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.23■□□□□ 0.51
SSR1P43307 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.23■□□□□ 0.51
SSR1P43307 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.23■□□□□ 0.51
SSR1P43307 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.23■□□□□ 0.51
SSR1P43307 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSR1P43307 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SSR1P43307 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SSR1P43307 TP73-AS1-210ENST00000637775 1455 ntBASIC18.23■□□□□ 0.51
SSR1P43307 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSR1P43307 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSR1P43307 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SSR1P43307 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.23■□□□□ 0.51
SSR1P43307 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SSR1P43307 STK19B-204ENST00000512515 211 ntBASIC18.23■□□□□ 0.51
SSR1P43307 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.23■□□□□ 0.51
SSR1P43307 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.23■□□□□ 0.51
SSR1P43307 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SSR1P43307 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SSR1P43307 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SSR1P43307 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSR1P43307 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.23■□□□□ 0.51
SSR1P43307 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.23■□□□□ 0.51
SSR1P43307 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSR1P43307 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SSR1P43307 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SSR1P43307 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSR1P43307 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms