Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.25■□□□□ 0.35
CCNFP41002 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.25■□□□□ 0.35
CCNFP41002 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNFP41002 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNFP41002 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCNFP41002 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCNFP41002 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNFP41002 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCNFP41002 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCNFP41002 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.24■□□□□ 0.35
CCNFP41002 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCNFP41002 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.24■□□□□ 0.35
CCNFP41002 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.24■□□□□ 0.35
CCNFP41002 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCNFP41002 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCNFP41002 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCNFP41002 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.24■□□□□ 0.35
CCNFP41002 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.24■□□□□ 0.35
CCNFP41002 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.24■□□□□ 0.35
CCNFP41002 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.24■□□□□ 0.35
CCNFP41002 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CCNFP41002 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CCNFP41002 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCNFP41002 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.24■□□□□ 0.35
CCNFP41002 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.24■□□□□ 0.35
CCNFP41002 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCNFP41002 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.24■□□□□ 0.35
CCNFP41002 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.24■□□□□ 0.35
CCNFP41002 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.24■□□□□ 0.35
CCNFP41002 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.24■□□□□ 0.35
CCNFP41002 AC011467.2-201ENST00000598425 242 ntBASIC17.24■□□□□ 0.35
CCNFP41002 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CCNFP41002 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCNFP41002 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.24■□□□□ 0.35
CCNFP41002 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.24■□□□□ 0.35
CCNFP41002 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCNFP41002 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCNFP41002 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCNFP41002 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCNFP41002 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
CCNFP41002 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.24■□□□□ 0.35
CCNFP41002 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCNFP41002 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCNFP41002 TP73-AS1-210ENST00000637775 1455 ntBASIC17.24■□□□□ 0.35
CCNFP41002 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CCNFP41002 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCNFP41002 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.23■□□□□ 0.35
CCNFP41002 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNFP41002 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.23■□□□□ 0.35
CCNFP41002 CYP2T1P-202ENST00000641596 2535 ntBASIC17.23■□□□□ 0.35
CCNFP41002 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CCNFP41002 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CCNFP41002 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCNFP41002 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNFP41002 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNFP41002 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNFP41002 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNFP41002 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNFP41002 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.23■□□□□ 0.35
CCNFP41002 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCNFP41002 AC103564.2-201ENST00000432853 1299 ntBASIC17.23■□□□□ 0.35
CCNFP41002 AC096582.2-201ENST00000510860 516 ntBASIC17.23■□□□□ 0.35
CCNFP41002 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.23■□□□□ 0.35
CCNFP41002 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.23■□□□□ 0.35
CCNFP41002 MIR3652-201ENST00000579335 131 ntBASIC17.23■□□□□ 0.35
CCNFP41002 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNFP41002 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.23■□□□□ 0.35
CCNFP41002 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCNFP41002 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.23■□□□□ 0.35
CCNFP41002 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCNFP41002 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCNFP41002 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.23■□□□□ 0.35
CCNFP41002 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.23■□□□□ 0.35
CCNFP41002 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNFP41002 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCNFP41002 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCNFP41002 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCNFP41002 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCNFP41002 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCNFP41002 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.22■□□□□ 0.35
CCNFP41002 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.22■□□□□ 0.35
CCNFP41002 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.22■□□□□ 0.35
CCNFP41002 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCNFP41002 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.22■□□□□ 0.35
CCNFP41002 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.22■□□□□ 0.35
CCNFP41002 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCNFP41002 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CCNFP41002 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCNFP41002 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.22■□□□□ 0.35
CCNFP41002 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CCNFP41002 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.22■□□□□ 0.35
CCNFP41002 NUS1P1-201ENST00000446295 882 ntBASIC17.22■□□□□ 0.35
CCNFP41002 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
CCNFP41002 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.22■□□□□ 0.35
CCNFP41002 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.22■□□□□ 0.35
CCNFP41002 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.22■□□□□ 0.35
CCNFP41002 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.22■□□□□ 0.35
CCNFP41002 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.22■□□□□ 0.35
CCNFP41002 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.22■□□□□ 0.35
CCNFP41002 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms