Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHKAP35790 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.08■□□□□ 0.48
CHKAP35790 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHKAP35790 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHKAP35790 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.08■□□□□ 0.48
CHKAP35790 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHKAP35790 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHKAP35790 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
CHKAP35790 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHKAP35790 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHKAP35790 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHKAP35790 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
CHKAP35790 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHKAP35790 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.08■□□□□ 0.48
CHKAP35790 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CHKAP35790 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHKAP35790 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.08■□□□□ 0.48
CHKAP35790 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
CHKAP35790 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.07■□□□□ 0.48
CHKAP35790 PCDHA14-201ENST00000506751 2298 ntBASIC18.07■□□□□ 0.48
CHKAP35790 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHKAP35790 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHKAP35790 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CHKAP35790 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHKAP35790 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.07■□□□□ 0.48
CHKAP35790 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHKAP35790 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHKAP35790 FLJ38576-201ENST00000623820 2459 ntBASIC18.07■□□□□ 0.48
CHKAP35790 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHKAP35790 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHKAP35790 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHKAP35790 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.07■□□□□ 0.48
CHKAP35790 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.07■□□□□ 0.48
CHKAP35790 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHKAP35790 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHKAP35790 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.07■□□□□ 0.48
CHKAP35790 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHKAP35790 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.07■□□□□ 0.48
CHKAP35790 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.07■□□□□ 0.48
CHKAP35790 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.07■□□□□ 0.48
CHKAP35790 IGHV3-22-201ENST00000520721 359 ntBASIC18.07■□□□□ 0.48
CHKAP35790 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.07■□□□□ 0.48
CHKAP35790 AC012640.2-201ENST00000561606 901 ntBASIC18.07■□□□□ 0.48
CHKAP35790 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHKAP35790 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.07■□□□□ 0.48
CHKAP35790 PGM5P2-202ENST00000637225 1043 ntBASIC18.07■□□□□ 0.48
CHKAP35790 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.07■□□□□ 0.48
CHKAP35790 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CHKAP35790 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHKAP35790 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHKAP35790 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHKAP35790 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CHKAP35790 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHKAP35790 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CHKAP35790 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CHKAP35790 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHKAP35790 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHKAP35790 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHKAP35790 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHKAP35790 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHKAP35790 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHKAP35790 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHKAP35790 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHKAP35790 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.06■□□□□ 0.48
CHKAP35790 AC005104.2-201ENST00000427818 678 ntBASIC18.06■□□□□ 0.48
CHKAP35790 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.06■□□□□ 0.48
CHKAP35790 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CHKAP35790 SLC25A1P1-201ENST00000528351 927 ntBASIC18.06■□□□□ 0.48
CHKAP35790 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.06■□□□□ 0.48
CHKAP35790 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CHKAP35790 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHKAP35790 MIR1199-201ENST00000621445 119 ntBASIC18.06■□□□□ 0.48
CHKAP35790 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.06■□□□□ 0.48
CHKAP35790 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CHKAP35790 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.06■□□□□ 0.48
CHKAP35790 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CHKAP35790 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHKAP35790 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHKAP35790 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHKAP35790 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHKAP35790 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHKAP35790 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.06■□□□□ 0.48
CHKAP35790 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHKAP35790 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHKAP35790 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHKAP35790 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.05■□□□□ 0.48
CHKAP35790 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHKAP35790 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHKAP35790 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CHKAP35790 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHKAP35790 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHKAP35790 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHKAP35790 MIR574-201ENST00000385209 96 ntBASIC18.05■□□□□ 0.48
CHKAP35790 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.05■□□□□ 0.48
CHKAP35790 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.05■□□□□ 0.48
CHKAP35790 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.05■□□□□ 0.48
CHKAP35790 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.05■□□□□ 0.48
CHKAP35790 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.05■□□□□ 0.48
CHKAP35790 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHKAP35790 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms