Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC091167.2-201ENST00000579581 588 ntBASIC19.2■□□□□ 0.66
CIITAP33076 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
CIITAP33076 AL513190.1-201ENST00000621254 727 ntBASIC19.2■□□□□ 0.66
CIITAP33076 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CIITAP33076 AL353732.1-201ENST00000569618 1459 ntBASIC19.2■□□□□ 0.66
CIITAP33076 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CIITAP33076 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CIITAP33076 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CIITAP33076 TUBB8P12-201ENST00000308911 1335 ntBASIC19.2■□□□□ 0.66
CIITAP33076 TUBB7P-202ENST00000428444 1305 ntBASIC19.2■□□□□ 0.66
CIITAP33076 TUBB8P7-204ENST00000567960 1332 ntBASIC19.2■□□□□ 0.66
CIITAP33076 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CIITAP33076 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CIITAP33076 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.2■□□□□ 0.66
CIITAP33076 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.2■□□□□ 0.66
CIITAP33076 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CIITAP33076 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CIITAP33076 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.2■□□□□ 0.66
CIITAP33076 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CIITAP33076 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CIITAP33076 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CIITAP33076 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.19■□□□□ 0.66
CIITAP33076 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CIITAP33076 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CIITAP33076 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CIITAP33076 AC025580.3-201ENST00000617932 1424 ntBASIC19.19■□□□□ 0.66
CIITAP33076 AC092068.3-201ENST00000587894 2016 ntBASIC19.19■□□□□ 0.66
CIITAP33076 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CIITAP33076 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CIITAP33076 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CIITAP33076 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CIITAP33076 AC023274.1-201ENST00000418278 595 ntBASIC19.19■□□□□ 0.66
CIITAP33076 MCCD1P2-201ENST00000423228 335 ntBASIC19.19■□□□□ 0.66
CIITAP33076 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.19■□□□□ 0.66
CIITAP33076 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.19■□□□□ 0.66
CIITAP33076 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.19■□□□□ 0.66
CIITAP33076 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.19■□□□□ 0.66
CIITAP33076 AC002347.1-201ENST00000569543 541 ntBASIC19.19■□□□□ 0.66
CIITAP33076 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.19■□□□□ 0.66
CIITAP33076 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
CIITAP33076 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CIITAP33076 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CIITAP33076 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CIITAP33076 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.19■□□□□ 0.66
CIITAP33076 BCAR1-209ENST00000546196 1340 ntBASIC19.19■□□□□ 0.66
CIITAP33076 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CIITAP33076 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CIITAP33076 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CIITAP33076 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CIITAP33076 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.18■□□□□ 0.66
CIITAP33076 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
CIITAP33076 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CIITAP33076 SLC22A20-204ENST00000530038 1673 ntBASIC19.18■□□□□ 0.66
CIITAP33076 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CIITAP33076 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CIITAP33076 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CIITAP33076 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CIITAP33076 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.18■□□□□ 0.66
CIITAP33076 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CIITAP33076 PDPK2P-202ENST00000562415 1191 ntBASIC19.18■□□□□ 0.66
CIITAP33076 MIR4492-201ENST00000581627 80 ntBASIC19.18■□□□□ 0.66
CIITAP33076 MPDU1-223ENST00000582151 728 ntBASIC19.18■□□□□ 0.66
CIITAP33076 MIR4515-201ENST00000584082 81 ntBASIC19.18■□□□□ 0.66
CIITAP33076 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.18■□□□□ 0.66
CIITAP33076 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.18■□□□□ 0.66
CIITAP33076 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CIITAP33076 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CIITAP33076 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CIITAP33076 AC060834.1-201ENST00000443027 2032 ntBASIC19.18■□□□□ 0.66
CIITAP33076 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CIITAP33076 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CIITAP33076 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CIITAP33076 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CIITAP33076 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CIITAP33076 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CIITAP33076 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
CIITAP33076 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.18■□□□□ 0.66
CIITAP33076 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CIITAP33076 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CIITAP33076 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CIITAP33076 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.17■□□□□ 0.66
CIITAP33076 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CIITAP33076 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CIITAP33076 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.17■□□□□ 0.66
CIITAP33076 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CIITAP33076 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CIITAP33076 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.17■□□□□ 0.66
CIITAP33076 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.17■□□□□ 0.66
CIITAP33076 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CIITAP33076 AL513480.1-201ENST00000451731 511 ntBASIC19.17■□□□□ 0.66
CIITAP33076 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.17■□□□□ 0.66
CIITAP33076 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.17■□□□□ 0.66
CIITAP33076 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.17■□□□□ 0.66
CIITAP33076 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.17■□□□□ 0.66
CIITAP33076 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CIITAP33076 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.17■□□□□ 0.66
CIITAP33076 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.17■□□□□ 0.66
CIITAP33076 AC023511.2-201ENST00000618803 211 ntBASIC19.17■□□□□ 0.66
CIITAP33076 AL645728.2-201ENST00000641974 660 ntBASIC19.17■□□□□ 0.66
CIITAP33076 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms