Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXA10P31260 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.67■□□□□ 0.9
HOXA10P31260 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXA10P31260 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXA10P31260 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA10P31260 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
HOXA10P31260 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXA10P31260 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.67■□□□□ 0.9
HOXA10P31260 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXA10P31260 AL021920.2-201ENST00000624828 1351 ntBASIC20.67■□□□□ 0.9
HOXA10P31260 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXA10P31260 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXA10P31260 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HOXA10P31260 AC116353.5-201ENST00000638148 1699 ntBASIC20.67■□□□□ 0.9
HOXA10P31260 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXA10P31260 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXA10P31260 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HOXA10P31260 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXA10P31260 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXA10P31260 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXA10P31260 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA10P31260 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXA10P31260 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXA10P31260 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA10P31260 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA10P31260 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXA10P31260 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
HOXA10P31260 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.66■□□□□ 0.9
HOXA10P31260 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXA10P31260 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.66■□□□□ 0.9
HOXA10P31260 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC20.66■□□□□ 0.9
HOXA10P31260 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.66■□□□□ 0.9
HOXA10P31260 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.66■□□□□ 0.9
HOXA10P31260 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20.66■□□□□ 0.9
HOXA10P31260 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA10P31260 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HOXA10P31260 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXA10P31260 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXA10P31260 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXA10P31260 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA10P31260 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXA10P31260 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA10P31260 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXA10P31260 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXA10P31260 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA10P31260 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA10P31260 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HOXA10P31260 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXA10P31260 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA10P31260 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA10P31260 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
HOXA10P31260 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA10P31260 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.65■□□□□ 0.9
HOXA10P31260 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA10P31260 TMPRSS11CP-201ENST00000453277 683 ntBASIC20.65■□□□□ 0.9
HOXA10P31260 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.65■□□□□ 0.9
HOXA10P31260 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXA10P31260 RN7SL692P-201ENST00000464677 288 ntBASIC20.65■□□□□ 0.9
HOXA10P31260 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA10P31260 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA10P31260 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXA10P31260 AC009407.1-201ENST00000568958 598 ntBASIC20.65■□□□□ 0.9
HOXA10P31260 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
HOXA10P31260 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA10P31260 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
HOXA10P31260 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA10P31260 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA10P31260 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA10P31260 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXA10P31260 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXA10P31260 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXA10P31260 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXA10P31260 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXA10P31260 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOXA10P31260 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HOXA10P31260 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HOXA10P31260 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
HOXA10P31260 AL035456.1-201ENST00000456064 1369 ntBASIC20.64■□□□□ 0.89
HOXA10P31260 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA10P31260 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.64■□□□□ 0.89
HOXA10P31260 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.64■□□□□ 0.89
HOXA10P31260 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.64■□□□□ 0.89
HOXA10P31260 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA10P31260 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA10P31260 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA10P31260 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA10P31260 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA10P31260 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXA10P31260 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.64■□□□□ 0.89
HOXA10P31260 AC135050.7-201ENST00000624508 2218 ntBASIC20.63■□□□□ 0.89
HOXA10P31260 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HOXA10P31260 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXA10P31260 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXA10P31260 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXA10P31260 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA10P31260 OR8S1-201ENST00000310194 1080 ntBASIC20.63■□□□□ 0.89
HOXA10P31260 HLA-H-201ENST00000383620 1096 ntBASIC20.63■□□□□ 0.89
HOXA10P31260 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HOXA10P31260 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXA10P31260 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms