Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC004840.1-201ENST00000636359 365 ntBASIC21.02■□□□□ 0.96
TM4SF1P30408 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM4SF1P30408 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC21.02■□□□□ 0.96
TM4SF1P30408 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.02■□□□□ 0.96
TM4SF1P30408 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TM4SF1P30408 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC21.02■□□□□ 0.95
TM4SF1P30408 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.01■□□□□ 0.95
TM4SF1P30408 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM4SF1P30408 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.01■□□□□ 0.95
TM4SF1P30408 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC21.01■□□□□ 0.95
TM4SF1P30408 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC21.01■□□□□ 0.95
TM4SF1P30408 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TM4SF1P30408 AC007541.1-201ENST00000570282 1469 ntBASIC21.01■□□□□ 0.95
TM4SF1P30408 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC21.01■□□□□ 0.95
TM4SF1P30408 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.01■□□□□ 0.95
TM4SF1P30408 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM4SF1P30408 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM4SF1P30408 LINC00896-202ENST00000609602 2128 ntBASIC21.01■□□□□ 0.95
TM4SF1P30408 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM4SF1P30408 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC21.01■□□□□ 0.95
TM4SF1P30408 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC21.01■□□□□ 0.95
TM4SF1P30408 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
TM4SF1P30408 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC21.01■□□□□ 0.95
TM4SF1P30408 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC21.01■□□□□ 0.95
TM4SF1P30408 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM4SF1P30408 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM4SF1P30408 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM4SF1P30408 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC21.01■□□□□ 0.95
TM4SF1P30408 EGFEM1P-202ENST00000431685 1563 ntBASIC21.01■□□□□ 0.95
TM4SF1P30408 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
TM4SF1P30408 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM4SF1P30408 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.01■□□□□ 0.95
TM4SF1P30408 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TM4SF1P30408 AL035456.1-201ENST00000456064 1369 ntBASIC21■□□□□ 0.95
TM4SF1P30408 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TM4SF1P30408 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TM4SF1P30408 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TM4SF1P30408 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TM4SF1P30408 PP14571-201ENST00000404327 934 ntTSL 2 BASIC21■□□□□ 0.95
TM4SF1P30408 RPL37AP1-201ENST00000412502 279 ntBASIC21■□□□□ 0.95
TM4SF1P30408 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC21■□□□□ 0.95
TM4SF1P30408 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC21■□□□□ 0.95
TM4SF1P30408 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC21■□□□□ 0.95
TM4SF1P30408 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC21■□□□□ 0.95
TM4SF1P30408 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TM4SF1P30408 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TM4SF1P30408 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
TM4SF1P30408 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC21■□□□□ 0.95
TM4SF1P30408 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TM4SF1P30408 AC021097.1-201ENST00000607902 574 ntBASIC21■□□□□ 0.95
TM4SF1P30408 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC21■□□□□ 0.95
TM4SF1P30408 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC21■□□□□ 0.95
TM4SF1P30408 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC21■□□□□ 0.95
TM4SF1P30408 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC21■□□□□ 0.95
TM4SF1P30408 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC21■□□□□ 0.95
TM4SF1P30408 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC21■□□□□ 0.95
TM4SF1P30408 AL354751.1-201ENST00000412768 1863 ntBASIC21■□□□□ 0.95
TM4SF1P30408 SLC9A3P2-201ENST00000447821 2021 ntBASIC21■□□□□ 0.95
TM4SF1P30408 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TM4SF1P30408 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC21■□□□□ 0.95
TM4SF1P30408 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21■□□□□ 0.95
TM4SF1P30408 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
TM4SF1P30408 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TM4SF1P30408 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TM4SF1P30408 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF1P30408 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF1P30408 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF1P30408 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TM4SF1P30408 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.99■□□□□ 0.95
TM4SF1P30408 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF1P30408 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.99■□□□□ 0.95
TM4SF1P30408 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF1P30408 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF1P30408 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.99■□□□□ 0.95
TM4SF1P30408 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF1P30408 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF1P30408 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF1P30408 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TM4SF1P30408 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF1P30408 SLC25A1P3-201ENST00000395415 828 ntBASIC20.99■□□□□ 0.95
TM4SF1P30408 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.99■□□□□ 0.95
TM4SF1P30408 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.99■□□□□ 0.95
TM4SF1P30408 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.99■□□□□ 0.95
TM4SF1P30408 CYP2A7P1-201ENST00000595391 815 ntBASIC20.99■□□□□ 0.95
TM4SF1P30408 AL132655.2-201ENST00000596276 594 ntBASIC20.99■□□□□ 0.95
TM4SF1P30408 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.99■□□□□ 0.95
TM4SF1P30408 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.99■□□□□ 0.95
TM4SF1P30408 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF1P30408 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF1P30408 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.99■□□□□ 0.95
TM4SF1P30408 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TM4SF1P30408 AC138969.3-201ENST00000546612 1459 ntBASIC20.99■□□□□ 0.95
TM4SF1P30408 AC138932.2-201ENST00000548268 1459 ntBASIC20.99■□□□□ 0.95
TM4SF1P30408 AC126755.4-201ENST00000549796 1459 ntBASIC20.99■□□□□ 0.95
TM4SF1P30408 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM4SF1P30408 AC133963.1-201ENST00000504166 1679 ntBASIC20.99■□□□□ 0.95
TM4SF1P30408 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM4SF1P30408 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TM4SF1P30408 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TM4SF1P30408 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms