Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMLP26374 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMLP26374 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMLP26374 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMLP26374 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMLP26374 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMLP26374 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.59■□□□□ 0.89
CHMLP26374 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.59■□□□□ 0.89
CHMLP26374 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.59■□□□□ 0.89
CHMLP26374 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.59■□□□□ 0.89
CHMLP26374 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.59■□□□□ 0.89
CHMLP26374 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMLP26374 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.59■□□□□ 0.89
CHMLP26374 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.59■□□□□ 0.89
CHMLP26374 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.59■□□□□ 0.89
CHMLP26374 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.59■□□□□ 0.89
CHMLP26374 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CHMLP26374 TP73-AS1-207ENST00000624167 988 ntBASIC20.59■□□□□ 0.89
CHMLP26374 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.59■□□□□ 0.89
CHMLP26374 AC107918.4-202ENST00000641623 219 ntBASIC20.59■□□□□ 0.89
CHMLP26374 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CHMLP26374 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMLP26374 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CHMLP26374 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMLP26374 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CHMLP26374 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMLP26374 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMLP26374 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMLP26374 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMLP26374 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMLP26374 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMLP26374 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMLP26374 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMLP26374 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMLP26374 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMLP26374 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
CHMLP26374 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMLP26374 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMLP26374 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMLP26374 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMLP26374 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHMLP26374 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.58■□□□□ 0.89
CHMLP26374 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMLP26374 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.58■□□□□ 0.89
CHMLP26374 ELK2BP-201ENST00000415014 1224 ntBASIC20.58■□□□□ 0.89
CHMLP26374 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHMLP26374 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.58■□□□□ 0.89
CHMLP26374 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.58■□□□□ 0.89
CHMLP26374 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.58■□□□□ 0.89
CHMLP26374 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMLP26374 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMLP26374 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.58■□□□□ 0.89
CHMLP26374 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHMLP26374 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.58■□□□□ 0.89
CHMLP26374 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMLP26374 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CHMLP26374 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.58■□□□□ 0.89
CHMLP26374 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMLP26374 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CHMLP26374 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMLP26374 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.58■□□□□ 0.88
CHMLP26374 KRT8P49-201ENST00000604166 1432 ntBASIC20.58■□□□□ 0.88
CHMLP26374 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.58■□□□□ 0.88
CHMLP26374 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.58■□□□□ 0.88
CHMLP26374 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.58■□□□□ 0.88
CHMLP26374 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMLP26374 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.58■□□□□ 0.88
CHMLP26374 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMLP26374 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CHMLP26374 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMLP26374 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMLP26374 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.58■□□□□ 0.88
CHMLP26374 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CHMLP26374 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHMLP26374 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMLP26374 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHMLP26374 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHMLP26374 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMLP26374 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMLP26374 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMLP26374 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMLP26374 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMLP26374 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHMLP26374 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHMLP26374 AL391256.1-201ENST00000443260 1855 ntBASIC20.57■□□□□ 0.88
CHMLP26374 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.57■□□□□ 0.88
CHMLP26374 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMLP26374 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.57■□□□□ 0.88
CHMLP26374 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMLP26374 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHMLP26374 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CHMLP26374 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CHMLP26374 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CHMLP26374 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHMLP26374 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.57■□□□□ 0.88
CHMLP26374 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHMLP26374 AL021920.2-201ENST00000624828 1351 ntBASIC20.57■□□□□ 0.88
CHMLP26374 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMLP26374 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.57■□□□□ 0.88
CHMLP26374 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms