Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.44■□□□□ 0.38
PTPN3P26045 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.44■□□□□ 0.38
PTPN3P26045 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.44■□□□□ 0.38
PTPN3P26045 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPN3P26045 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PTPN3P26045 AC004706.3-202ENST00000621574 984 ntBASIC17.44■□□□□ 0.38
PTPN3P26045 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PTPN3P26045 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN3P26045 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN3P26045 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PTPN3P26045 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN3P26045 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN3P26045 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPN3P26045 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPN3P26045 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN3P26045 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPN3P26045 PCDHB17P-201ENST00000539533 2393 ntBASIC17.44■□□□□ 0.38
PTPN3P26045 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.44■□□□□ 0.38
PTPN3P26045 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.44■□□□□ 0.38
PTPN3P26045 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN3P26045 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN3P26045 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN3P26045 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN3P26045 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN3P26045 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PTPN3P26045 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN3P26045 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN3P26045 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN3P26045 AC243591.1-201ENST00000452967 1364 ntBASIC17.43■□□□□ 0.38
PTPN3P26045 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN3P26045 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN3P26045 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PTPN3P26045 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.43■□□□□ 0.38
PTPN3P26045 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.43■□□□□ 0.38
PTPN3P26045 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.43■□□□□ 0.38
PTPN3P26045 EMBP1-201ENST00000458200 901 ntBASIC17.43■□□□□ 0.38
PTPN3P26045 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.43■□□□□ 0.38
PTPN3P26045 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PTPN3P26045 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.43■□□□□ 0.38
PTPN3P26045 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PTPN3P26045 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.43■□□□□ 0.38
PTPN3P26045 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.43■□□□□ 0.38
PTPN3P26045 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN3P26045 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN3P26045 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.43■□□□□ 0.38
PTPN3P26045 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.43■□□□□ 0.38
PTPN3P26045 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN3P26045 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN3P26045 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
PTPN3P26045 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.43■□□□□ 0.38
PTPN3P26045 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN3P26045 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN3P26045 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN3P26045 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PTPN3P26045 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.43■□□□□ 0.38
PTPN3P26045 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN3P26045 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
PTPN3P26045 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN3P26045 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.42■□□□□ 0.38
PTPN3P26045 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
PTPN3P26045 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PTPN3P26045 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN3P26045 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN3P26045 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN3P26045 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.42■□□□□ 0.38
PTPN3P26045 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN3P26045 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN3P26045 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN3P26045 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN3P26045 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN3P26045 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN3P26045 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.42■□□□□ 0.38
PTPN3P26045 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.42■□□□□ 0.38
PTPN3P26045 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.42■□□□□ 0.38
PTPN3P26045 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.42■□□□□ 0.38
PTPN3P26045 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN3P26045 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.42■□□□□ 0.38
PTPN3P26045 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN3P26045 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN3P26045 TERC-201ENST00000602385 541 ntBASIC17.42■□□□□ 0.38
PTPN3P26045 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.42■□□□□ 0.38
PTPN3P26045 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PTPN3P26045 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN3P26045 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN3P26045 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN3P26045 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
PTPN3P26045 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.42■□□□□ 0.38
PTPN3P26045 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN3P26045 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN3P26045 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN3P26045 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN3P26045 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN3P26045 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN3P26045 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN3P26045 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN3P26045 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN3P26045 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN3P26045 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN3P26045 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
PTPN3P26045 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms