Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC130P13994 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC130P13994 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC130P13994 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
CCDC130P13994 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC130P13994 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC130P13994 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CCDC130P13994 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC130P13994 OR6D1P-202ENST00000641007 5290 ntBASIC18.1■□□□□ 0.49
CCDC130P13994 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC130P13994 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC130P13994 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC130P13994 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CCDC130P13994 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC130P13994 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCDC130P13994 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CCDC130P13994 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC130P13994 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC130P13994 CRYGEP-201ENST00000412192 528 ntBASIC18.1■□□□□ 0.49
CCDC130P13994 IGLL3P-201ENST00000412472 434 ntBASIC18.1■□□□□ 0.49
CCDC130P13994 PRSS29P-201ENST00000440800 595 ntBASIC18.1■□□□□ 0.49
CCDC130P13994 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC130P13994 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC130P13994 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.1■□□□□ 0.49
CCDC130P13994 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC130P13994 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC130P13994 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC130P13994 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.1■□□□□ 0.49
CCDC130P13994 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC130P13994 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC130P13994 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCDC130P13994 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC130P13994 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC130P13994 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC130P13994 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC130P13994 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CCDC130P13994 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CCDC130P13994 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC130P13994 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.09■□□□□ 0.49
CCDC130P13994 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC130P13994 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC130P13994 AC002310.6-201ENST00000624451 1377 ntBASIC18.09■□□□□ 0.49
CCDC130P13994 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC130P13994 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC130P13994 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC130P13994 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CCDC130P13994 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC130P13994 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.09■□□□□ 0.49
CCDC130P13994 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC130P13994 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC130P13994 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.09■□□□□ 0.49
CCDC130P13994 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC130P13994 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC130P13994 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC130P13994 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC130P13994 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC130P13994 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC130P13994 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC130P13994 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC130P13994 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC130P13994 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC130P13994 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC130P13994 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC130P13994 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC130P13994 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC130P13994 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC130P13994 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC130P13994 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.08■□□□□ 0.49
CCDC130P13994 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CCDC130P13994 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC130P13994 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC130P13994 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CCDC130P13994 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC130P13994 KRT18P2-201ENST00000447938 1258 ntBASIC18.08■□□□□ 0.48
CCDC130P13994 HCG4B-203ENST00000450128 991 ntBASIC18.08■□□□□ 0.48
CCDC130P13994 KRT18P3-201ENST00000451602 1288 ntBASIC18.08■□□□□ 0.48
CCDC130P13994 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CCDC130P13994 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC130P13994 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CCDC130P13994 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC130P13994 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC130P13994 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC130P13994 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC130P13994 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC130P13994 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CCDC130P13994 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC130P13994 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC130P13994 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC130P13994 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC130P13994 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC130P13994 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC130P13994 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC130P13994 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.07■□□□□ 0.48
CCDC130P13994 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC130P13994 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC130P13994 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC130P13994 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC130P13994 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC130P13994 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC130P13994 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms