Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.25□□□□□ -0.13
CTSDP07339 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.25□□□□□ -0.13
CTSDP07339 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CTSDP07339 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CTSDP07339 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CTSDP07339 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.25□□□□□ -0.13
CTSDP07339 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.24□□□□□ -0.13
CTSDP07339 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.24□□□□□ -0.13
CTSDP07339 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSDP07339 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTSDP07339 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSDP07339 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
CTSDP07339 TUBB8P12-201ENST00000308911 1335 ntBASIC14.24□□□□□ -0.13
CTSDP07339 TUBB7P-202ENST00000428444 1305 ntBASIC14.24□□□□□ -0.13
CTSDP07339 TUBB8P7-204ENST00000567960 1332 ntBASIC14.24□□□□□ -0.13
CTSDP07339 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSDP07339 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.24□□□□□ -0.13
CTSDP07339 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CTSDP07339 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.24□□□□□ -0.13
CTSDP07339 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.24□□□□□ -0.13
CTSDP07339 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTSDP07339 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSDP07339 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CTSDP07339 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.24□□□□□ -0.13
CTSDP07339 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.24□□□□□ -0.13
CTSDP07339 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.24□□□□□ -0.13
CTSDP07339 AP003733.1-201ENST00000491725 852 ntBASIC14.24□□□□□ -0.13
CTSDP07339 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.24□□□□□ -0.13
CTSDP07339 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.24□□□□□ -0.13
CTSDP07339 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.24□□□□□ -0.13
CTSDP07339 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
CTSDP07339 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.24□□□□□ -0.13
CTSDP07339 AC141257.4-201ENST00000634557 245 ntBASIC14.24□□□□□ -0.13
CTSDP07339 AC136944.6-201ENST00000634818 245 ntBASIC14.24□□□□□ -0.13
CTSDP07339 MTHFR-217ENST00000641820 1569 ntBASIC14.24□□□□□ -0.13
CTSDP07339 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTSDP07339 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
CTSDP07339 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSDP07339 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSDP07339 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CTSDP07339 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTSDP07339 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTSDP07339 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSDP07339 AL365203.3-201ENST00000609742 2057 ntBASIC14.24□□□□□ -0.13
CTSDP07339 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTSDP07339 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CTSDP07339 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSDP07339 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.24□□□□□ -0.13
CTSDP07339 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSDP07339 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSDP07339 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.24□□□□□ -0.13
CTSDP07339 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
CTSDP07339 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.23□□□□□ -0.13
CTSDP07339 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.23□□□□□ -0.13
CTSDP07339 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CTSDP07339 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.23□□□□□ -0.13
CTSDP07339 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.23□□□□□ -0.13
CTSDP07339 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.23□□□□□ -0.13
CTSDP07339 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CTSDP07339 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CTSDP07339 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.23□□□□□ -0.13
CTSDP07339 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.23□□□□□ -0.13
CTSDP07339 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.23□□□□□ -0.13
CTSDP07339 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.23□□□□□ -0.13
CTSDP07339 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.23□□□□□ -0.13
CTSDP07339 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.23□□□□□ -0.13
CTSDP07339 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CTSDP07339 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSDP07339 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms