Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.54■□□□□ 0.88
APPP05067 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
APPP05067 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
APPP05067 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
APPP05067 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
APPP05067 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
APPP05067 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
APPP05067 AP002414.1-201ENST00000391405 1147 ntBASIC20.54■□□□□ 0.88
APPP05067 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
APPP05067 MIR940-201ENST00000401276 94 ntBASIC20.54■□□□□ 0.88
APPP05067 AC009947.1-201ENST00000444350 727 ntBASIC20.54■□□□□ 0.88
APPP05067 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.54■□□□□ 0.88
APPP05067 AC108751.1-201ENST00000490852 363 ntBASIC20.54■□□□□ 0.88
APPP05067 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.54■□□□□ 0.88
APPP05067 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.54■□□□□ 0.88
APPP05067 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.54■□□□□ 0.88
APPP05067 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.54■□□□□ 0.88
APPP05067 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.54■□□□□ 0.88
APPP05067 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.54■□□□□ 0.88
APPP05067 AC008667.4-201ENST00000607370 168 ntBASIC20.54■□□□□ 0.88
APPP05067 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.54■□□□□ 0.88
APPP05067 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
APPP05067 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
APPP05067 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
APPP05067 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.54■□□□□ 0.88
APPP05067 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.54■□□□□ 0.88
APPP05067 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
APPP05067 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.54■□□□□ 0.88
APPP05067 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
APPP05067 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
APPP05067 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.53■□□□□ 0.88
APPP05067 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
APPP05067 AL023806.1-201ENST00000603994 1649 ntBASIC20.53■□□□□ 0.88
APPP05067 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
APPP05067 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
APPP05067 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
APPP05067 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
APPP05067 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
APPP05067 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
APPP05067 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
APPP05067 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
APPP05067 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
APPP05067 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
APPP05067 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
APPP05067 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.53■□□□□ 0.88
APPP05067 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
APPP05067 AC106730.1-201ENST00000566722 1090 ntBASIC20.53■□□□□ 0.88
APPP05067 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.53■□□□□ 0.88
APPP05067 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
APPP05067 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
APPP05067 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
APPP05067 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
APPP05067 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.53■□□□□ 0.88
APPP05067 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
APPP05067 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.53■□□□□ 0.88
APPP05067 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
APPP05067 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
APPP05067 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.53■□□□□ 0.88
APPP05067 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.53■□□□□ 0.88
APPP05067 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
APPP05067 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
APPP05067 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
APPP05067 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.52■□□□□ 0.88
APPP05067 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
APPP05067 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
APPP05067 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
APPP05067 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
APPP05067 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
APPP05067 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.52■□□□□ 0.88
APPP05067 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
APPP05067 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
APPP05067 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
APPP05067 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.52■□□□□ 0.88
APPP05067 IGHV3-65-201ENST00000523210 341 ntBASIC20.52■□□□□ 0.88
APPP05067 AC145285.3-201ENST00000564603 959 ntBASIC20.52■□□□□ 0.88
APPP05067 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
APPP05067 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.52■□□□□ 0.88
APPP05067 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
APPP05067 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
APPP05067 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
APPP05067 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
APPP05067 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
APPP05067 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
APPP05067 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.52■□□□□ 0.87
APPP05067 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
APPP05067 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
APPP05067 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
APPP05067 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.51■□□□□ 0.87
APPP05067 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
APPP05067 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.51■□□□□ 0.87
APPP05067 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APPP05067 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APPP05067 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.51■□□□□ 0.87
APPP05067 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APPP05067 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
APPP05067 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
APPP05067 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
APPP05067 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
APPP05067 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
APPP05067 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms