Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.2■□□□□ 0.18
MT-ND1P03886 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.2■□□□□ 0.18
MT-ND1P03886 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
MT-ND1P03886 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.2■□□□□ 0.18
MT-ND1P03886 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
MT-ND1P03886 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.2■□□□□ 0.18
MT-ND1P03886 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MT-ND1P03886 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.19■□□□□ 0.18
MT-ND1P03886 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND1P03886 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND1P03886 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND1P03886 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.19■□□□□ 0.18
MT-ND1P03886 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND1P03886 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
MT-ND1P03886 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND1P03886 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
MT-ND1P03886 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND1P03886 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND1P03886 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
MT-ND1P03886 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.19■□□□□ 0.18
MT-ND1P03886 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND1P03886 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND1P03886 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND1P03886 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND1P03886 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND1P03886 YBX1P2-201ENST00000489612 999 ntBASIC16.19■□□□□ 0.18
MT-ND1P03886 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.19■□□□□ 0.18
MT-ND1P03886 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
MT-ND1P03886 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND1P03886 AC139887.4-201ENST00000607877 719 ntBASIC16.19■□□□□ 0.18
MT-ND1P03886 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
MT-ND1P03886 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
MT-ND1P03886 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.19■□□□□ 0.18
MT-ND1P03886 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND1P03886 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.19■□□□□ 0.18
MT-ND1P03886 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND1P03886 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.19■□□□□ 0.18
MT-ND1P03886 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND1P03886 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.19■□□□□ 0.18
MT-ND1P03886 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.19■□□□□ 0.18
MT-ND1P03886 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.19■□□□□ 0.18
MT-ND1P03886 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND1P03886 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MT-ND1P03886 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.18■□□□□ 0.18
MT-ND1P03886 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND1P03886 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND1P03886 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND1P03886 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND1P03886 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND1P03886 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
MT-ND1P03886 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.18■□□□□ 0.18
MT-ND1P03886 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND1P03886 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND1P03886 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND1P03886 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND1P03886 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
MT-ND1P03886 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.18■□□□□ 0.18
MT-ND1P03886 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.18■□□□□ 0.18
MT-ND1P03886 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND1P03886 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.18■□□□□ 0.18
MT-ND1P03886 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.18■□□□□ 0.18
MT-ND1P03886 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.18■□□□□ 0.18
MT-ND1P03886 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND1P03886 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND1P03886 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
MT-ND1P03886 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND1P03886 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
MT-ND1P03886 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.18■□□□□ 0.18
MT-ND1P03886 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND1P03886 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.18■□□□□ 0.18
MT-ND1P03886 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.18■□□□□ 0.18
MT-ND1P03886 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND1P03886 AC073508.3-201ENST00000619697 1419 ntBASIC16.18■□□□□ 0.18
MT-ND1P03886 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND1P03886 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.18■□□□□ 0.18
MT-ND1P03886 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
MT-ND1P03886 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.18■□□□□ 0.18
MT-ND1P03886 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.18■□□□□ 0.18
MT-ND1P03886 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND1P03886 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
MT-ND1P03886 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND1P03886 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND1P03886 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND1P03886 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND1P03886 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND1P03886 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND1P03886 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.17■□□□□ 0.18
MT-ND1P03886 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
MT-ND1P03886 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
MT-ND1P03886 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.17■□□□□ 0.18
MT-ND1P03886 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND1P03886 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MT-ND1P03886 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms