Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.92■□□□□ 0.46
TRUB2O95900 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRUB2O95900 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRUB2O95900 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRUB2O95900 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRUB2O95900 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.92■□□□□ 0.46
TRUB2O95900 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.92■□□□□ 0.46
TRUB2O95900 PTCHD3P3-201ENST00000403073 906 ntBASIC17.92■□□□□ 0.46
TRUB2O95900 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRUB2O95900 AC098831.1-202ENST00000438821 336 ntBASIC17.92■□□□□ 0.46
TRUB2O95900 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.92■□□□□ 0.46
TRUB2O95900 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.92■□□□□ 0.46
TRUB2O95900 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.92■□□□□ 0.46
TRUB2O95900 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRUB2O95900 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.92■□□□□ 0.46
TRUB2O95900 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.92■□□□□ 0.46
TRUB2O95900 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRUB2O95900 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRUB2O95900 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRUB2O95900 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRUB2O95900 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRUB2O95900 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRUB2O95900 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRUB2O95900 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRUB2O95900 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRUB2O95900 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRUB2O95900 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRUB2O95900 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.91■□□□□ 0.46
TRUB2O95900 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRUB2O95900 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRUB2O95900 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRUB2O95900 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.91■□□□□ 0.46
TRUB2O95900 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRUB2O95900 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.91■□□□□ 0.46
TRUB2O95900 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRUB2O95900 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRUB2O95900 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.91■□□□□ 0.46
TRUB2O95900 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRUB2O95900 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRUB2O95900 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.91■□□□□ 0.46
TRUB2O95900 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.91■□□□□ 0.46
TRUB2O95900 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.91■□□□□ 0.46
TRUB2O95900 AC117500.6-201ENST00000624871 588 ntBASIC17.91■□□□□ 0.46
TRUB2O95900 PGM5P2-202ENST00000637225 1043 ntBASIC17.91■□□□□ 0.46
TRUB2O95900 AL805961.1-202ENST00000641562 540 ntBASIC17.91■□□□□ 0.46
TRUB2O95900 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRUB2O95900 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRUB2O95900 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRUB2O95900 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRUB2O95900 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRUB2O95900 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.91■□□□□ 0.46
TRUB2O95900 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TRUB2O95900 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.91■□□□□ 0.46
TRUB2O95900 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.91■□□□□ 0.46
TRUB2O95900 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRUB2O95900 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRUB2O95900 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRUB2O95900 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.9■□□□□ 0.46
TRUB2O95900 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TRUB2O95900 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRUB2O95900 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.9■□□□□ 0.46
TRUB2O95900 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRUB2O95900 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRUB2O95900 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRUB2O95900 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.9■□□□□ 0.46
TRUB2O95900 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRUB2O95900 AL590627.1-203ENST00000421194 1026 ntBASIC17.9■□□□□ 0.46
TRUB2O95900 RPS15P9-201ENST00000494093 319 ntBASIC17.9■□□□□ 0.46
TRUB2O95900 IGHV3-22-201ENST00000520721 359 ntBASIC17.9■□□□□ 0.46
TRUB2O95900 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.9■□□□□ 0.46
TRUB2O95900 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.9■□□□□ 0.46
TRUB2O95900 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.9■□□□□ 0.46
TRUB2O95900 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.9■□□□□ 0.46
TRUB2O95900 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
TRUB2O95900 AC005593.1-201ENST00000624894 515 ntBASIC17.9■□□□□ 0.46
TRUB2O95900 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRUB2O95900 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRUB2O95900 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRUB2O95900 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.9■□□□□ 0.46
TRUB2O95900 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
TRUB2O95900 IL9RP2-201ENST00000423948 1312 ntBASIC17.9■□□□□ 0.46
TRUB2O95900 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.9■□□□□ 0.46
TRUB2O95900 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRUB2O95900 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRUB2O95900 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRUB2O95900 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRUB2O95900 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRUB2O95900 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.9■□□□□ 0.46
TRUB2O95900 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRUB2O95900 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRUB2O95900 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRUB2O95900 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.9■□□□□ 0.46
TRUB2O95900 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.9■□□□□ 0.46
TRUB2O95900 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRUB2O95900 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRUB2O95900 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRUB2O95900 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRUB2O95900 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRUB2O95900 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRUB2O95900 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms