Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX6O95503 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBX6O95503 LINC02012-201ENST00000608206 1725 ntBASIC17.12■□□□□ 0.33
CBX6O95503 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CBX6O95503 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.12■□□□□ 0.33
CBX6O95503 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.12■□□□□ 0.33
CBX6O95503 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CBX6O95503 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBX6O95503 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBX6O95503 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX6O95503 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX6O95503 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CBX6O95503 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
CBX6O95503 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CBX6O95503 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CBX6O95503 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.11■□□□□ 0.33
CBX6O95503 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
CBX6O95503 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.11■□□□□ 0.33
CBX6O95503 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.11■□□□□ 0.33
CBX6O95503 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CBX6O95503 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 AP000347.1-202ENST00000435868 847 ntBASIC17.11■□□□□ 0.33
CBX6O95503 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
CBX6O95503 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.11■□□□□ 0.33
CBX6O95503 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.11■□□□□ 0.33
CBX6O95503 AC092597.1-201ENST00000487352 616 ntBASIC17.11■□□□□ 0.33
CBX6O95503 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.11■□□□□ 0.33
CBX6O95503 UNC93B7-201ENST00000509439 705 ntBASIC17.11■□□□□ 0.33
CBX6O95503 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.11■□□□□ 0.33
CBX6O95503 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.11■□□□□ 0.33
CBX6O95503 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CBX6O95503 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.11■□□□□ 0.33
CBX6O95503 AC009065.1-201ENST00000564055 1225 ntBASIC17.11■□□□□ 0.33
CBX6O95503 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.11■□□□□ 0.33
CBX6O95503 AC011498.5-201ENST00000592027 486 ntBASIC17.11■□□□□ 0.33
CBX6O95503 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 FER1L4-210ENST00000615531 5998 ntBASIC17.11■□□□□ 0.33
CBX6O95503 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.11■□□□□ 0.33
CBX6O95503 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 AC016734.2-201ENST00000624325 1377 ntBASIC17.11■□□□□ 0.33
CBX6O95503 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 KRT8P10-201ENST00000450021 1447 ntBASIC17.11■□□□□ 0.33
CBX6O95503 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CBX6O95503 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.11■□□□□ 0.33
CBX6O95503 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.11■□□□□ 0.33
CBX6O95503 AC092364.2-201ENST00000596710 2692 ntBASIC17.11■□□□□ 0.33
CBX6O95503 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.11■□□□□ 0.33
CBX6O95503 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX6O95503 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.11■□□□□ 0.33
CBX6O95503 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX6O95503 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX6O95503 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX6O95503 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CBX6O95503 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX6O95503 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX6O95503 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX6O95503 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX6O95503 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX6O95503 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CBX6O95503 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.1■□□□□ 0.33
CBX6O95503 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.1■□□□□ 0.33
CBX6O95503 BX276092.5-203ENST00000456199 560 ntBASIC17.1■□□□□ 0.33
CBX6O95503 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX6O95503 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.1■□□□□ 0.33
CBX6O95503 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CBX6O95503 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.1■□□□□ 0.33
CBX6O95503 MIR3180-1-201ENST00000580374 94 ntBASIC17.1■□□□□ 0.33
CBX6O95503 MIR3180-3-201ENST00000584616 94 ntBASIC17.1■□□□□ 0.33
CBX6O95503 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX6O95503 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX6O95503 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CBX6O95503 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX6O95503 AL121672.3-201ENST00000608644 468 ntBASIC17.1■□□□□ 0.33
CBX6O95503 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX6O95503 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX6O95503 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX6O95503 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CBX6O95503 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CBX6O95503 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CBX6O95503 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CBX6O95503 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CBX6O95503 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CBX6O95503 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms