Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC22.38■■□□□ 1.17
LTN1O94822 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
LTN1O94822 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LTN1O94822 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
LTN1O94822 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
LTN1O94822 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
LTN1O94822 AC027369.6-201ENST00000525520 931 ntBASIC22.38■■□□□ 1.17
LTN1O94822 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC22.38■■□□□ 1.17
LTN1O94822 TEX28P1-201ENST00000613479 1221 ntBASIC22.38■■□□□ 1.17
LTN1O94822 TEX28P2-201ENST00000617764 1221 ntBASIC22.38■■□□□ 1.17
LTN1O94822 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC22.37■■□□□ 1.17
LTN1O94822 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
LTN1O94822 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC22.37■■□□□ 1.17
LTN1O94822 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
LTN1O94822 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
LTN1O94822 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC22.37■■□□□ 1.17
LTN1O94822 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
LTN1O94822 AC009477.1-201ENST00000452936 217 ntBASIC22.37■■□□□ 1.17
LTN1O94822 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC22.37■■□□□ 1.17
LTN1O94822 PUDP-206ENST00000540122 825 ntTSL 2 BASIC22.37■■□□□ 1.17
LTN1O94822 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC22.37■■□□□ 1.17
LTN1O94822 AC021097.1-201ENST00000607902 574 ntBASIC22.37■■□□□ 1.17
LTN1O94822 AL844908.2-201ENST00000609461 460 ntBASIC22.37■■□□□ 1.17
LTN1O94822 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LTN1O94822 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LTN1O94822 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC22.37■■□□□ 1.17
LTN1O94822 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC22.37■■□□□ 1.17
LTN1O94822 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC22.36■■□□□ 1.17
LTN1O94822 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC22.36■■□□□ 1.17
LTN1O94822 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC22.36■■□□□ 1.17
LTN1O94822 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC22.36■■□□□ 1.17
LTN1O94822 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LTN1O94822 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC22.36■■□□□ 1.17
LTN1O94822 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
LTN1O94822 EDF1-203ENST00000371649 790 ntTSL 2 BASIC22.36■■□□□ 1.17
LTN1O94822 AC007274.1-201ENST00000439805 662 ntBASIC22.36■■□□□ 1.17
LTN1O94822 KRT18P34-201ENST00000488218 1270 ntBASIC22.36■■□□□ 1.17
LTN1O94822 NAA50-208ENST00000497255 789 ntTSL 5 BASIC22.36■■□□□ 1.17
LTN1O94822 WASH4P-201ENST00000564273 1246 ntBASIC22.36■■□□□ 1.17
LTN1O94822 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC22.36■■□□□ 1.17
LTN1O94822 SRP9-204ENST00000619790 377 ntTSL 2 BASIC22.36■■□□□ 1.17
LTN1O94822 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LTN1O94822 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LTN1O94822 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LTN1O94822 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
LTN1O94822 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC22.36■■□□□ 1.17
LTN1O94822 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC22.36■■□□□ 1.17
LTN1O94822 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LTN1O94822 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LTN1O94822 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
LTN1O94822 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
LTN1O94822 HNRNPA3P1-201ENST00000401429 1139 ntBASIC22.35■■□□□ 1.17
LTN1O94822 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
LTN1O94822 HNRNPA3P5-201ENST00000455201 833 ntBASIC22.35■■□□□ 1.17
LTN1O94822 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC22.35■■□□□ 1.17
LTN1O94822 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC22.35■■□□□ 1.17
LTN1O94822 AC009118.2-201ENST00000613275 655 ntBASIC22.35■■□□□ 1.17
LTN1O94822 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
LTN1O94822 AP001350.2-201ENST00000625104 1094 ntBASIC22.35■■□□□ 1.17
LTN1O94822 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
LTN1O94822 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LTN1O94822 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
LTN1O94822 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LTN1O94822 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
LTN1O94822 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC22.35■■□□□ 1.17
LTN1O94822 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
LTN1O94822 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LTN1O94822 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
LTN1O94822 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
LTN1O94822 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LTN1O94822 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LTN1O94822 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LTN1O94822 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
LTN1O94822 HLA-H-201ENST00000383620 1096 ntBASIC22.35■■□□□ 1.17
LTN1O94822 GRAP-202ENST00000395635 834 ntTSL 2 BASIC22.35■■□□□ 1.17
LTN1O94822 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC22.35■■□□□ 1.17
LTN1O94822 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC22.35■■□□□ 1.17
LTN1O94822 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
LTN1O94822 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LTN1O94822 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC22.35■■□□□ 1.17
LTN1O94822 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC22.35■■□□□ 1.17
LTN1O94822 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC22.35■■□□□ 1.17
LTN1O94822 AL132655.2-201ENST00000596276 594 ntBASIC22.35■■□□□ 1.17
LTN1O94822 AC134043.2-201ENST00000624206 2238 ntBASIC22.35■■□□□ 1.17
LTN1O94822 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC22.34■■□□□ 1.17
LTN1O94822 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC22.34■■□□□ 1.17
LTN1O94822 AC073439.1-201ENST00000624121 1774 ntBASIC22.34■■□□□ 1.17
LTN1O94822 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
LTN1O94822 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC22.34■■□□□ 1.17
LTN1O94822 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LTN1O94822 COX5BP8-201ENST00000416911 349 ntBASIC22.34■■□□□ 1.17
LTN1O94822 GAPDHP21-201ENST00000450301 1010 ntBASIC22.34■■□□□ 1.17
LTN1O94822 HLA-J-202ENST00000469281 1241 ntBASIC22.34■■□□□ 1.17
LTN1O94822 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LTN1O94822 AC018529.1-201ENST00000613063 361 ntBASIC22.34■■□□□ 1.17
LTN1O94822 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC22.34■■□□□ 1.17
LTN1O94822 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC22.34■■□□□ 1.17
LTN1O94822 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LTN1O94822 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
LTN1O94822 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms