Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC4O75487 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC4O75487 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GPC4O75487 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
GPC4O75487 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.19■□□□□ 0.34
GPC4O75487 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC4O75487 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC4O75487 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
GPC4O75487 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
GPC4O75487 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GPC4O75487 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC4O75487 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
GPC4O75487 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.19■□□□□ 0.34
GPC4O75487 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.19■□□□□ 0.34
GPC4O75487 ABCD1P5-201ENST00000445663 754 ntBASIC17.19■□□□□ 0.34
GPC4O75487 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.19■□□□□ 0.34
GPC4O75487 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC4O75487 PRELID1P1-202ENST00000567272 903 ntBASIC17.19■□□□□ 0.34
GPC4O75487 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.19■□□□□ 0.34
GPC4O75487 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
GPC4O75487 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
GPC4O75487 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.19■□□□□ 0.34
GPC4O75487 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC4O75487 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC4O75487 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GPC4O75487 AL118508.1-201ENST00000613502 2345 ntBASIC17.19■□□□□ 0.34
GPC4O75487 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
GPC4O75487 AC132938.5-201ENST00000624980 1813 ntBASIC17.19■□□□□ 0.34
GPC4O75487 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC4O75487 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPC4O75487 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.18■□□□□ 0.34
GPC4O75487 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPC4O75487 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.18■□□□□ 0.34
GPC4O75487 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.18■□□□□ 0.34
GPC4O75487 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GPC4O75487 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
GPC4O75487 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.18■□□□□ 0.34
GPC4O75487 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPC4O75487 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
GPC4O75487 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPC4O75487 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.18■□□□□ 0.34
GPC4O75487 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPC4O75487 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.18■□□□□ 0.34
GPC4O75487 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.18■□□□□ 0.34
GPC4O75487 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.18■□□□□ 0.34
GPC4O75487 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
GPC4O75487 AC132008.2-207ENST00000454517 770 ntBASIC17.18■□□□□ 0.34
GPC4O75487 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.18■□□□□ 0.34
GPC4O75487 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.18■□□□□ 0.34
GPC4O75487 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GPC4O75487 AC012313.10-201ENST00000623509 926 ntBASIC17.18■□□□□ 0.34
GPC4O75487 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
GPC4O75487 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.18■□□□□ 0.34
GPC4O75487 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPC4O75487 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
GPC4O75487 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPC4O75487 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GPC4O75487 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.18■□□□□ 0.34
GPC4O75487 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
GPC4O75487 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GPC4O75487 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
GPC4O75487 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GPC4O75487 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPC4O75487 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.18■□□□□ 0.34
GPC4O75487 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GPC4O75487 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
GPC4O75487 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
GPC4O75487 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
GPC4O75487 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GPC4O75487 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.17■□□□□ 0.34
GPC4O75487 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GPC4O75487 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.17■□□□□ 0.34
GPC4O75487 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GPC4O75487 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
GPC4O75487 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GPC4O75487 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.17■□□□□ 0.34
GPC4O75487 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.17■□□□□ 0.34
GPC4O75487 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC4O75487 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
GPC4O75487 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC4O75487 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC4O75487 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.17■□□□□ 0.34
GPC4O75487 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GPC4O75487 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC4O75487 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GPC4O75487 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.17■□□□□ 0.34
GPC4O75487 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC4O75487 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.17■□□□□ 0.34
GPC4O75487 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC4O75487 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC4O75487 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC4O75487 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.17■□□□□ 0.34
GPC4O75487 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GPC4O75487 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.17■□□□□ 0.34
GPC4O75487 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.17■□□□□ 0.34
GPC4O75487 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.17■□□□□ 0.34
GPC4O75487 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.17■□□□□ 0.34
GPC4O75487 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.17■□□□□ 0.34
GPC4O75487 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.17■□□□□ 0.34
GPC4O75487 AC091304.2-201ENST00000564639 760 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms