Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCN1O60741 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCN1O60741 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.05■□□□□ 0.16
HCN1O60741 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCN1O60741 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.05■□□□□ 0.16
HCN1O60741 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCN1O60741 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.05■□□□□ 0.16
HCN1O60741 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HCN1O60741 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCN1O60741 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.05■□□□□ 0.16
HCN1O60741 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCN1O60741 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.05■□□□□ 0.16
HCN1O60741 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.05■□□□□ 0.16
HCN1O60741 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.05■□□□□ 0.16
HCN1O60741 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.05■□□□□ 0.16
HCN1O60741 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HCN1O60741 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.05■□□□□ 0.16
HCN1O60741 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.05■□□□□ 0.16
HCN1O60741 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.05■□□□□ 0.16
HCN1O60741 AC093909.1-201ENST00000504731 1122 ntBASIC16.05■□□□□ 0.16
HCN1O60741 AC079776.4-201ENST00000511039 504 ntBASIC16.05■□□□□ 0.16
HCN1O60741 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
HCN1O60741 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.05■□□□□ 0.16
HCN1O60741 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.05■□□□□ 0.16
HCN1O60741 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
HCN1O60741 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.05■□□□□ 0.16
HCN1O60741 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.05■□□□□ 0.16
HCN1O60741 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.05■□□□□ 0.16
HCN1O60741 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
HCN1O60741 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCN1O60741 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
HCN1O60741 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCN1O60741 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCN1O60741 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
HCN1O60741 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCN1O60741 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HCN1O60741 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HCN1O60741 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
HCN1O60741 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCN1O60741 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCN1O60741 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HCN1O60741 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.04■□□□□ 0.16
HCN1O60741 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCN1O60741 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCN1O60741 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HCN1O60741 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HCN1O60741 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HCN1O60741 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCN1O60741 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.04■□□□□ 0.16
HCN1O60741 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCN1O60741 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HCN1O60741 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
HCN1O60741 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HCN1O60741 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCN1O60741 RPS2P28-201ENST00000314255 741 ntBASIC16.04■□□□□ 0.16
HCN1O60741 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCN1O60741 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.04■□□□□ 0.16
HCN1O60741 AL031284.1-201ENST00000419297 478 ntBASIC16.04■□□□□ 0.16
HCN1O60741 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.04■□□□□ 0.16
HCN1O60741 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.04■□□□□ 0.16
HCN1O60741 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.04■□□□□ 0.16
HCN1O60741 BX640515.1-201ENST00000617215 977 ntBASIC16.04■□□□□ 0.16
HCN1O60741 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
HCN1O60741 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCN1O60741 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
HCN1O60741 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCN1O60741 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCN1O60741 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.04■□□□□ 0.16
HCN1O60741 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCN1O60741 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCN1O60741 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.04■□□□□ 0.16
HCN1O60741 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HCN1O60741 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.03■□□□□ 0.16
HCN1O60741 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.03■□□□□ 0.16
HCN1O60741 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCN1O60741 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HCN1O60741 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HCN1O60741 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
HCN1O60741 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.03■□□□□ 0.16
HCN1O60741 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.03■□□□□ 0.16
HCN1O60741 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.03■□□□□ 0.16
HCN1O60741 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.03■□□□□ 0.16
HCN1O60741 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.03■□□□□ 0.16
HCN1O60741 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
HCN1O60741 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HCN1O60741 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCN1O60741 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCN1O60741 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.03■□□□□ 0.16
HCN1O60741 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
HCN1O60741 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCN1O60741 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCN1O60741 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCN1O60741 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCN1O60741 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.03■□□□□ 0.16
HCN1O60741 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCN1O60741 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCN1O60741 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HCN1O60741 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.03■□□□□ 0.16
HCN1O60741 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HCN1O60741 AC018712.1-201ENST00000455767 687 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms