Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
ZIC3O60481 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.35■□□□□ 0.05
ZIC3O60481 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.35■□□□□ 0.05
ZIC3O60481 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.35■□□□□ 0.05
ZIC3O60481 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.35■□□□□ 0.05
ZIC3O60481 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.35■□□□□ 0.05
ZIC3O60481 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
ZIC3O60481 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
ZIC3O60481 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
ZIC3O60481 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.35■□□□□ 0.05
ZIC3O60481 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
ZIC3O60481 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZIC3O60481 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZIC3O60481 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
ZIC3O60481 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZIC3O60481 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.35■□□□□ 0.05
ZIC3O60481 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.35■□□□□ 0.05
ZIC3O60481 AC106820.2-201ENST00000563775 3264 ntBASIC15.35■□□□□ 0.05
ZIC3O60481 TOP3BP1-201ENST00000420768 1380 ntBASIC15.35■□□□□ 0.05
ZIC3O60481 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
ZIC3O60481 AC025580.3-201ENST00000617932 1424 ntBASIC15.34■□□□□ 0.05
ZIC3O60481 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ZIC3O60481 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.34■□□□□ 0.05
ZIC3O60481 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZIC3O60481 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZIC3O60481 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZIC3O60481 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.34■□□□□ 0.05
ZIC3O60481 AC026471.1-201ENST00000564629 3026 ntBASIC15.34■□□□□ 0.05
ZIC3O60481 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZIC3O60481 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
ZIC3O60481 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.34■□□□□ 0.05
ZIC3O60481 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZIC3O60481 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZIC3O60481 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZIC3O60481 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZIC3O60481 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ZIC3O60481 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZIC3O60481 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZIC3O60481 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.34■□□□□ 0.05
ZIC3O60481 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
ZIC3O60481 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ZIC3O60481 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
ZIC3O60481 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.34■□□□□ 0.05
ZIC3O60481 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ZIC3O60481 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZIC3O60481 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
ZIC3O60481 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ZIC3O60481 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.34■□□□□ 0.05
ZIC3O60481 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
ZIC3O60481 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.34■□□□□ 0.05
ZIC3O60481 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZIC3O60481 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZIC3O60481 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZIC3O60481 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.34■□□□□ 0.05
ZIC3O60481 AL513190.1-201ENST00000621254 727 ntBASIC15.34■□□□□ 0.05
ZIC3O60481 AC007064.4-201ENST00000637740 555 ntBASIC15.34■□□□□ 0.05
ZIC3O60481 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
ZIC3O60481 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZIC3O60481 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZIC3O60481 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ZIC3O60481 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.34■□□□□ 0.05
ZIC3O60481 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ZIC3O60481 AL021920.2-201ENST00000624828 1351 ntBASIC15.34■□□□□ 0.05
ZIC3O60481 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ZIC3O60481 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZIC3O60481 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ZIC3O60481 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZIC3O60481 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
ZIC3O60481 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.34■□□□□ 0.05
ZIC3O60481 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZIC3O60481 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ZIC3O60481 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.33■□□□□ 0.05
ZIC3O60481 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ZIC3O60481 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.33■□□□□ 0.04
ZIC3O60481 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZIC3O60481 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZIC3O60481 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZIC3O60481 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZIC3O60481 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZIC3O60481 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.33■□□□□ 0.04
ZIC3O60481 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZIC3O60481 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZIC3O60481 AC004832.2-201ENST00000426397 482 ntBASIC15.33■□□□□ 0.04
ZIC3O60481 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.33■□□□□ 0.04
ZIC3O60481 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.33■□□□□ 0.04
ZIC3O60481 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.33■□□□□ 0.04
ZIC3O60481 AL513480.1-201ENST00000451731 511 ntBASIC15.33■□□□□ 0.04
ZIC3O60481 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
ZIC3O60481 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.33■□□□□ 0.04
ZIC3O60481 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.33■□□□□ 0.04
ZIC3O60481 KRT19P2-202ENST00000557173 1012 ntBASIC15.33■□□□□ 0.04
ZIC3O60481 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.33■□□□□ 0.04
ZIC3O60481 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZIC3O60481 AC023141.13-201ENST00000604991 943 ntBASIC15.33■□□□□ 0.04
ZIC3O60481 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.33■□□□□ 0.04
ZIC3O60481 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZIC3O60481 BCAR1-209ENST00000546196 1340 ntBASIC15.33■□□□□ 0.04
ZIC3O60481 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZIC3O60481 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ZIC3O60481 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms