Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.23■□□□□ 0.35
SMAD6O43541 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.23■□□□□ 0.35
SMAD6O43541 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SMAD6O43541 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.23■□□□□ 0.35
SMAD6O43541 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SMAD6O43541 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.23■□□□□ 0.35
SMAD6O43541 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.23■□□□□ 0.35
SMAD6O43541 GPALPP1-207ENST00000611650 899 ntBASIC17.23■□□□□ 0.35
SMAD6O43541 AC007064.4-201ENST00000637740 555 ntBASIC17.23■□□□□ 0.35
SMAD6O43541 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.23■□□□□ 0.35
SMAD6O43541 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.23■□□□□ 0.35
SMAD6O43541 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.23■□□□□ 0.35
SMAD6O43541 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 AC092068.3-201ENST00000587894 2016 ntBASIC17.23■□□□□ 0.35
SMAD6O43541 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.23■□□□□ 0.35
SMAD6O43541 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.23■□□□□ 0.35
SMAD6O43541 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.23■□□□□ 0.35
SMAD6O43541 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMAD6O43541 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD6O43541 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD6O43541 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
SMAD6O43541 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.22■□□□□ 0.35
SMAD6O43541 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD6O43541 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD6O43541 AC138932.1-201ENST00000534164 6830 ntBASIC17.22■□□□□ 0.35
SMAD6O43541 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.22■□□□□ 0.35
SMAD6O43541 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD6O43541 MIR1233-2-201ENST00000408138 82 ntBASIC17.22■□□□□ 0.35
SMAD6O43541 MIR1233-1-201ENST00000408722 82 ntBASIC17.22■□□□□ 0.35
SMAD6O43541 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD6O43541 DNAJB3-201ENST00000446806 729 ntBASIC17.22■□□□□ 0.35
SMAD6O43541 ALG1L5P-201ENST00000482043 771 ntBASIC17.22■□□□□ 0.35
SMAD6O43541 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.22■□□□□ 0.35
SMAD6O43541 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.22■□□□□ 0.35
SMAD6O43541 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.22■□□□□ 0.35
SMAD6O43541 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.22■□□□□ 0.35
SMAD6O43541 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.22■□□□□ 0.35
SMAD6O43541 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.22■□□□□ 0.35
SMAD6O43541 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD6O43541 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.22■□□□□ 0.35
SMAD6O43541 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD6O43541 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD6O43541 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD6O43541 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMAD6O43541 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.22■□□□□ 0.35
SMAD6O43541 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SMAD6O43541 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SMAD6O43541 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD6O43541 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.21■□□□□ 0.35
SMAD6O43541 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD6O43541 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.21■□□□□ 0.35
SMAD6O43541 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD6O43541 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SMAD6O43541 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD6O43541 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD6O43541 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD6O43541 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.21■□□□□ 0.35
SMAD6O43541 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.21■□□□□ 0.35
SMAD6O43541 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD6O43541 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD6O43541 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD6O43541 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.21■□□□□ 0.35
SMAD6O43541 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.21■□□□□ 0.35
SMAD6O43541 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SMAD6O43541 AC074386.1-202ENST00000463561 864 ntBASIC17.21■□□□□ 0.35
SMAD6O43541 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.21■□□□□ 0.35
SMAD6O43541 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.21■□□□□ 0.35
SMAD6O43541 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD6O43541 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD6O43541 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD6O43541 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD6O43541 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SMAD6O43541 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD6O43541 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMAD6O43541 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
SMAD6O43541 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SMAD6O43541 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.21■□□□□ 0.34
SMAD6O43541 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.21■□□□□ 0.34
SMAD6O43541 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.2■□□□□ 0.34
SMAD6O43541 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMAD6O43541 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMAD6O43541 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.2■□□□□ 0.34
SMAD6O43541 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMAD6O43541 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
SMAD6O43541 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMAD6O43541 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms