Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC107918.2-201ENST00000530817 355 ntBASIC19.64■□□□□ 0.73
PRPF3O43395 AC145285.3-201ENST00000564603 959 ntBASIC19.64■□□□□ 0.73
PRPF3O43395 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRPF3O43395 IL9RP2-201ENST00000423948 1312 ntBASIC19.64■□□□□ 0.73
PRPF3O43395 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.64■□□□□ 0.73
PRPF3O43395 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.64■□□□□ 0.73
PRPF3O43395 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PRPF3O43395 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PRPF3O43395 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRPF3O43395 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRPF3O43395 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
PRPF3O43395 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PRPF3O43395 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRPF3O43395 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRPF3O43395 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
PRPF3O43395 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRPF3O43395 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PRPF3O43395 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRPF3O43395 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.63■□□□□ 0.73
PRPF3O43395 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRPF3O43395 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRPF3O43395 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.63■□□□□ 0.73
PRPF3O43395 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRPF3O43395 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRPF3O43395 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
PRPF3O43395 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.63■□□□□ 0.73
PRPF3O43395 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRPF3O43395 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRPF3O43395 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRPF3O43395 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.63■□□□□ 0.73
PRPF3O43395 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PRPF3O43395 AC129492.6-201ENST00000611383 1305 ntBASIC19.63■□□□□ 0.73
PRPF3O43395 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRPF3O43395 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.63■□□□□ 0.73
PRPF3O43395 PRSS29P-201ENST00000440800 595 ntBASIC19.63■□□□□ 0.73
PRPF3O43395 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
PRPF3O43395 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.63■□□□□ 0.73
PRPF3O43395 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.63■□□□□ 0.73
PRPF3O43395 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
PRPF3O43395 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRPF3O43395 BX640515.1-201ENST00000617215 977 ntBASIC19.63■□□□□ 0.73
PRPF3O43395 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PRPF3O43395 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRPF3O43395 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRPF3O43395 AC106886.4-201ENST00000623557 2502 ntBASIC19.63■□□□□ 0.73
PRPF3O43395 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRPF3O43395 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRPF3O43395 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRPF3O43395 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PRPF3O43395 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.63■□□□□ 0.73
PRPF3O43395 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PRPF3O43395 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF3O43395 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.62■□□□□ 0.73
PRPF3O43395 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF3O43395 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
PRPF3O43395 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF3O43395 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF3O43395 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF3O43395 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF3O43395 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PRPF3O43395 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.62■□□□□ 0.73
PRPF3O43395 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.62■□□□□ 0.73
PRPF3O43395 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PRPF3O43395 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.62■□□□□ 0.73
PRPF3O43395 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF3O43395 AC010654.1-201ENST00000615722 808 ntBASIC19.62■□□□□ 0.73
PRPF3O43395 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF3O43395 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF3O43395 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF3O43395 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF3O43395 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF3O43395 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF3O43395 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF3O43395 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF3O43395 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF3O43395 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF3O43395 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRPF3O43395 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.61■□□□□ 0.73
PRPF3O43395 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PRPF3O43395 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRPF3O43395 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.61■□□□□ 0.73
PRPF3O43395 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.61■□□□□ 0.73
PRPF3O43395 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.61■□□□□ 0.73
PRPF3O43395 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.61■□□□□ 0.73
PRPF3O43395 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRPF3O43395 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRPF3O43395 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.61■□□□□ 0.73
PRPF3O43395 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRPF3O43395 AL590627.1-203ENST00000421194 1026 ntBASIC19.61■□□□□ 0.73
PRPF3O43395 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
PRPF3O43395 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
PRPF3O43395 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRPF3O43395 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.61■□□□□ 0.73
PRPF3O43395 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRPF3O43395 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.61■□□□□ 0.73
PRPF3O43395 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.61■□□□□ 0.73
PRPF3O43395 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.61■□□□□ 0.73
PRPF3O43395 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PRPF3O43395 Z83851.2-201ENST00000609564 659 ntBASIC19.61■□□□□ 0.73
PRPF3O43395 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms