Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SNPHO15079 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SNPHO15079 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SNPHO15079 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SNPHO15079 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SNPHO15079 PP12613-201ENST00000424958 2230 ntBASIC16.33■□□□□ 0.2
SNPHO15079 PCDHB19P-201ENST00000570871 2371 ntBASIC16.33■□□□□ 0.2
SNPHO15079 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
SNPHO15079 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.33■□□□□ 0.2
SNPHO15079 DUSP5P1-201ENST00000441325 1139 ntBASIC16.33■□□□□ 0.2
SNPHO15079 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC16.33■□□□□ 0.2
SNPHO15079 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.33■□□□□ 0.2
SNPHO15079 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.33■□□□□ 0.2
SNPHO15079 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC16.33■□□□□ 0.2
SNPHO15079 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.33■□□□□ 0.2
SNPHO15079 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC16.33■□□□□ 0.2
SNPHO15079 AC005336.2-201ENST00000593183 939 ntBASIC16.33■□□□□ 0.2
SNPHO15079 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SNPHO15079 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SNPHO15079 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
SNPHO15079 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.33■□□□□ 0.2
SNPHO15079 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.33■□□□□ 0.2
SNPHO15079 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.33■□□□□ 0.2
SNPHO15079 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SNPHO15079 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SNPHO15079 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.33■□□□□ 0.2
SNPHO15079 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.33■□□□□ 0.2
SNPHO15079 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SNPHO15079 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNPHO15079 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.32■□□□□ 0.2
SNPHO15079 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNPHO15079 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.32■□□□□ 0.2
SNPHO15079 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNPHO15079 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNPHO15079 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNPHO15079 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SNPHO15079 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SNPHO15079 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNPHO15079 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNPHO15079 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNPHO15079 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNPHO15079 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNPHO15079 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNPHO15079 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.32■□□□□ 0.2
SNPHO15079 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SNPHO15079 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNPHO15079 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNPHO15079 AC240504.1-201ENST00000395709 845 ntBASIC16.32■□□□□ 0.2
SNPHO15079 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SNPHO15079 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.32■□□□□ 0.2
SNPHO15079 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNPHO15079 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
SNPHO15079 MINOS1P3-201ENST00000457048 203 ntBASIC16.32■□□□□ 0.2
SNPHO15079 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.32■□□□□ 0.2
SNPHO15079 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.32■□□□□ 0.2
SNPHO15079 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.32■□□□□ 0.2
SNPHO15079 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.32■□□□□ 0.2
SNPHO15079 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SNPHO15079 KRT126P-201ENST00000549467 1181 ntBASIC16.32■□□□□ 0.2
SNPHO15079 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.32■□□□□ 0.2
SNPHO15079 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNPHO15079 AC138028.4-201ENST00000564984 1845 ntBASIC16.32■□□□□ 0.2
SNPHO15079 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SNPHO15079 AC003956.1-201ENST00000598450 356 ntTSL 3 BASIC16.32■□□□□ 0.2
SNPHO15079 AC099336.1-202ENST00000602961 463 ntBASIC16.32■□□□□ 0.2
SNPHO15079 AL121894.2-201ENST00000602977 491 ntBASIC16.32■□□□□ 0.2
SNPHO15079 REXO1L9P-201ENST00000604264 2108 ntBASIC16.32■□□□□ 0.2
SNPHO15079 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SNPHO15079 UCHL3-206ENST00000618773 1050 ntTSL 5 BASIC16.32■□□□□ 0.2
SNPHO15079 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SNPHO15079 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNPHO15079 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SNPHO15079 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNPHO15079 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNPHO15079 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNPHO15079 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms