Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.71■□□□□ 0.43
TRANK1O15050 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.71■□□□□ 0.43
TRANK1O15050 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.71■□□□□ 0.43
TRANK1O15050 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRANK1O15050 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
TRANK1O15050 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRANK1O15050 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRANK1O15050 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRANK1O15050 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.7■□□□□ 0.42
TRANK1O15050 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.7■□□□□ 0.42
TRANK1O15050 MIR4259-201ENST00000584466 101 ntBASIC17.7■□□□□ 0.42
TRANK1O15050 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRANK1O15050 AL133338.1-201ENST00000565695 1517 ntBASIC17.7■□□□□ 0.42
TRANK1O15050 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRANK1O15050 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRANK1O15050 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRANK1O15050 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRANK1O15050 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRANK1O15050 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRANK1O15050 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRANK1O15050 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.7■□□□□ 0.42
TRANK1O15050 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.7■□□□□ 0.42
TRANK1O15050 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.7■□□□□ 0.42
TRANK1O15050 AC073439.1-201ENST00000624121 1774 ntBASIC17.7■□□□□ 0.42
TRANK1O15050 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.7■□□□□ 0.42
TRANK1O15050 AL355312.1-201ENST00000407115 2176 ntBASIC17.7■□□□□ 0.42
TRANK1O15050 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.7■□□□□ 0.42
TRANK1O15050 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.69■□□□□ 0.42
TRANK1O15050 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRANK1O15050 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRANK1O15050 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRANK1O15050 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.69■□□□□ 0.42
TRANK1O15050 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRANK1O15050 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRANK1O15050 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.69■□□□□ 0.42
TRANK1O15050 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.69■□□□□ 0.42
TRANK1O15050 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRANK1O15050 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
TRANK1O15050 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRANK1O15050 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRANK1O15050 AC087499.6-201ENST00000411576 835 ntBASIC17.69■□□□□ 0.42
TRANK1O15050 AC098850.1-201ENST00000419919 790 ntBASIC17.69■□□□□ 0.42
TRANK1O15050 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.69■□□□□ 0.42
TRANK1O15050 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRANK1O15050 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.69■□□□□ 0.42
TRANK1O15050 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.69■□□□□ 0.42
TRANK1O15050 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRANK1O15050 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRANK1O15050 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.69■□□□□ 0.42
TRANK1O15050 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRANK1O15050 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRANK1O15050 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRANK1O15050 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRANK1O15050 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.68■□□□□ 0.42
TRANK1O15050 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.68■□□□□ 0.42
TRANK1O15050 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRANK1O15050 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRANK1O15050 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRANK1O15050 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRANK1O15050 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.68■□□□□ 0.42
TRANK1O15050 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.68■□□□□ 0.42
TRANK1O15050 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRANK1O15050 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.68■□□□□ 0.42
TRANK1O15050 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRANK1O15050 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRANK1O15050 AC093004.1-201ENST00000508850 424 ntBASIC17.68■□□□□ 0.42
TRANK1O15050 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.68■□□□□ 0.42
TRANK1O15050 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.68■□□□□ 0.42
TRANK1O15050 AL139099.5-201ENST00000635274 300 ntBASIC17.68■□□□□ 0.42
TRANK1O15050 CETN4P-206ENST00000642099 2168 ntBASIC17.68■□□□□ 0.42
TRANK1O15050 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRANK1O15050 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.68■□□□□ 0.42
TRANK1O15050 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRANK1O15050 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.68■□□□□ 0.42
TRANK1O15050 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRANK1O15050 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRANK1O15050 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRANK1O15050 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.68■□□□□ 0.42
TRANK1O15050 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.68■□□□□ 0.42
TRANK1O15050 AC022210.1-201ENST00000449856 793 ntBASIC17.68■□□□□ 0.42
TRANK1O15050 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRANK1O15050 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRANK1O15050 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.68■□□□□ 0.42
TRANK1O15050 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.68■□□□□ 0.42
TRANK1O15050 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.68■□□□□ 0.42
TRANK1O15050 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.68■□□□□ 0.42
TRANK1O15050 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.68■□□□□ 0.42
TRANK1O15050 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRANK1O15050 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.68■□□□□ 0.42
TRANK1O15050 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.68■□□□□ 0.42
TRANK1O15050 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRANK1O15050 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.67■□□□□ 0.42
TRANK1O15050 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
TRANK1O15050 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRANK1O15050 KRT18P55-202ENST00000578578 1546 ntBASIC17.67■□□□□ 0.42
TRANK1O15050 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.67■□□□□ 0.42
TRANK1O15050 KRT8P44-201ENST00000441609 1350 ntBASIC17.67■□□□□ 0.42
TRANK1O15050 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.67■□□□□ 0.42
TRANK1O15050 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRANK1O15050 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms