Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CUX2O14529 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CUX2O14529 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CUX2O14529 GGCT-203ENST00000409144 836 ntTSL 2 BASIC28.83■■■□□ 2.21
CUX2O14529 AC098850.1-201ENST00000419919 790 ntBASIC28.83■■■□□ 2.21
CUX2O14529 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CUX2O14529 AL353705.2-201ENST00000428243 662 ntBASIC28.83■■■□□ 2.21
CUX2O14529 AC006033.1-201ENST00000440505 426 ntBASIC28.83■■■□□ 2.21
CUX2O14529 CSF2RBP1-201ENST00000447905 391 ntBASIC28.83■■■□□ 2.21
CUX2O14529 KLF2P4-201ENST00000451959 1225 ntBASIC28.83■■■□□ 2.21
CUX2O14529 FO681548.1-201ENST00000455617 1132 ntBASIC28.83■■■□□ 2.21
CUX2O14529 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CUX2O14529 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CUX2O14529 AC073389.1-201ENST00000595595 795 ntBASIC28.83■■■□□ 2.21
CUX2O14529 AL031055.1-201ENST00000606362 631 ntBASIC28.83■■■□□ 2.21
CUX2O14529 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC28.83■■■□□ 2.21
CUX2O14529 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CUX2O14529 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CUX2O14529 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
CUX2O14529 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC28.83■■■□□ 2.21
CUX2O14529 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CUX2O14529 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CUX2O14529 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CUX2O14529 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CUX2O14529 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
CUX2O14529 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CUX2O14529 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC28.82■■■□□ 2.2
CUX2O14529 RNU1-129P-201ENST00000384064 167 ntBASIC28.82■■■□□ 2.2
CUX2O14529 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC28.82■■■□□ 2.2
CUX2O14529 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC28.82■■■□□ 2.2
CUX2O14529 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC28.82■■■□□ 2.2
CUX2O14529 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC28.82■■■□□ 2.2
CUX2O14529 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC28.82■■■□□ 2.2
CUX2O14529 AL138918.1-201ENST00000568306 659 ntBASIC28.82■■■□□ 2.2
CUX2O14529 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC28.82■■■□□ 2.2
CUX2O14529 U1.21-201ENST00000580816 167 ntBASIC28.82■■■□□ 2.2
CUX2O14529 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CUX2O14529 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC28.82■■■□□ 2.2
CUX2O14529 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC28.82■■■□□ 2.2
CUX2O14529 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC28.82■■■□□ 2.2
CUX2O14529 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CUX2O14529 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CUX2O14529 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CUX2O14529 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
CUX2O14529 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
CUX2O14529 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
CUX2O14529 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
CUX2O14529 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CUX2O14529 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
CUX2O14529 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
CUX2O14529 HINT2P1-201ENST00000419438 481 ntBASIC28.81■■■□□ 2.2
CUX2O14529 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC28.81■■■□□ 2.2
CUX2O14529 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC28.81■■■□□ 2.2
CUX2O14529 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC28.81■■■□□ 2.2
CUX2O14529 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC28.81■■■□□ 2.2
CUX2O14529 MIR4706-201ENST00000582134 82 ntBASIC28.81■■■□□ 2.2
CUX2O14529 AC233724.13-201ENST00000598383 410 ntBASIC28.81■■■□□ 2.2
CUX2O14529 5S_rRNA.22-201ENST00000614916 106 ntBASIC28.81■■■□□ 2.2
CUX2O14529 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC28.81■■■□□ 2.2
CUX2O14529 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CUX2O14529 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CUX2O14529 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC28.81■■■□□ 2.2
CUX2O14529 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
CUX2O14529 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
CUX2O14529 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC28.81■■■□□ 2.2
CUX2O14529 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
CUX2O14529 AC135776.1-201ENST00000319817 2481 ntBASIC28.81■■■□□ 2.2
CUX2O14529 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC28.81■■■□□ 2.2
CUX2O14529 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC28.81■■■□□ 2.2
CUX2O14529 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC28.8■■■□□ 2.2
CUX2O14529 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CUX2O14529 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
CUX2O14529 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CUX2O14529 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CUX2O14529 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
CUX2O14529 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
CUX2O14529 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC28.8■■■□□ 2.2
CUX2O14529 BTNL10-201ENST00000595971 695 ntBASIC28.8■■■□□ 2.2
CUX2O14529 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC28.8■■■□□ 2.2
CUX2O14529 AC093726.1-201ENST00000608064 963 ntBASIC28.8■■■□□ 2.2
CUX2O14529 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CUX2O14529 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC28.8■■■□□ 2.2
CUX2O14529 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
CUX2O14529 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC28.8■■■□□ 2.2
CUX2O14529 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
CUX2O14529 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
CUX2O14529 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CUX2O14529 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CUX2O14529 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CUX2O14529 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CUX2O14529 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
CUX2O14529 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC28.79■■■□□ 2.2
CUX2O14529 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC28.79■■■□□ 2.2
CUX2O14529 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC28.79■■■□□ 2.2
CUX2O14529 AL365330.1-201ENST00000607459 531 ntBASIC28.79■■■□□ 2.2
CUX2O14529 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CUX2O14529 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
CUX2O14529 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CUX2O14529 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC28.79■■■□□ 2.2
CUX2O14529 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC28.79■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms