Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 AL845331.1-201ENST00000424978 1190 ntBASIC15.67■□□□□ 0.1
CENPBD1B2RD01 AC103564.2-201ENST00000432853 1299 ntBASIC15.67■□□□□ 0.1
CENPBD1B2RD01 DRAXINP1-201ENST00000437611 948 ntBASIC15.67■□□□□ 0.1
CENPBD1B2RD01 TSSC2-201ENST00000450217 709 ntBASIC15.67■□□□□ 0.1
CENPBD1B2RD01 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 AC009533.2-201ENST00000543664 586 ntBASIC15.67■□□□□ 0.1
CENPBD1B2RD01 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CENPBD1B2RD01 AC026691.1-201ENST00000602502 2017 ntBASIC15.67■□□□□ 0.1
CENPBD1B2RD01 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 FAM220CP-201ENST00000395253 831 ntBASIC15.66■□□□□ 0.1
CENPBD1B2RD01 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 AC007967.3-201ENST00000434308 558 ntBASIC15.66■□□□□ 0.1
CENPBD1B2RD01 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 AC091076.1-201ENST00000610741 619 ntBASIC15.66■□□□□ 0.1
CENPBD1B2RD01 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 AC010460.3-201ENST00000511359 1579 ntBASIC15.66■□□□□ 0.1
CENPBD1B2RD01 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CENPBD1B2RD01 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPBD1B2RD01 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.65■□□□□ 0.1
CENPBD1B2RD01 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.65■□□□□ 0.1
CENPBD1B2RD01 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CENPBD1B2RD01 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CENPBD1B2RD01 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.65■□□□□ 0.1
CENPBD1B2RD01 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPBD1B2RD01 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPBD1B2RD01 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CENPBD1B2RD01 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CENPBD1B2RD01 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CENPBD1B2RD01 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.65■□□□□ 0.1
CENPBD1B2RD01 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPBD1B2RD01 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CENPBD1B2RD01 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPBD1B2RD01 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPBD1B2RD01 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPBD1B2RD01 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.65■□□□□ 0.1
CENPBD1B2RD01 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPBD1B2RD01 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CENPBD1B2RD01 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms