Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RCCD1A6NED2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.2■□□□□ 0.5
RCCD1A6NED2 AC022616.7-201ENST00000525383 220 ntBASIC18.2■□□□□ 0.5
RCCD1A6NED2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.2■□□□□ 0.5
RCCD1A6NED2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RCCD1A6NED2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
RCCD1A6NED2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.2■□□□□ 0.5
RCCD1A6NED2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RCCD1A6NED2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RCCD1A6NED2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RCCD1A6NED2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.2■□□□□ 0.5
RCCD1A6NED2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RCCD1A6NED2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RCCD1A6NED2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCCD1A6NED2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCCD1A6NED2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.19■□□□□ 0.5
RCCD1A6NED2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RCCD1A6NED2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCCD1A6NED2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.19■□□□□ 0.5
RCCD1A6NED2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.19■□□□□ 0.5
RCCD1A6NED2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.19■□□□□ 0.5
RCCD1A6NED2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.19■□□□□ 0.5
RCCD1A6NED2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCCD1A6NED2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCCD1A6NED2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.19■□□□□ 0.5
RCCD1A6NED2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCCD1A6NED2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCCD1A6NED2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCCD1A6NED2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCCD1A6NED2 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RCCD1A6NED2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCCD1A6NED2 AC211429.1-201ENST00000415277 523 ntBASIC18.19■□□□□ 0.5
RCCD1A6NED2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.19■□□□□ 0.5
RCCD1A6NED2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.19■□□□□ 0.5
RCCD1A6NED2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.19■□□□□ 0.5
RCCD1A6NED2 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.19■□□□□ 0.5
RCCD1A6NED2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RCCD1A6NED2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RCCD1A6NED2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RCCD1A6NED2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.19■□□□□ 0.5
RCCD1A6NED2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
RCCD1A6NED2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCCD1A6NED2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCCD1A6NED2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCCD1A6NED2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
RCCD1A6NED2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCCD1A6NED2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
RCCD1A6NED2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCCD1A6NED2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RCCD1A6NED2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCCD1A6NED2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCCD1A6NED2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCCD1A6NED2 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCCD1A6NED2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCCD1A6NED2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCCD1A6NED2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCCD1A6NED2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCCD1A6NED2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCCD1A6NED2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCCD1A6NED2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCCD1A6NED2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCCD1A6NED2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RCCD1A6NED2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 KRT8P26-201ENST00000534154 1276 ntBASIC18.18■□□□□ 0.5
RCCD1A6NED2 AC009533.2-201ENST00000543664 586 ntBASIC18.18■□□□□ 0.5
RCCD1A6NED2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 LINC01023-201ENST00000606054 436 ntBASIC18.18■□□□□ 0.5
RCCD1A6NED2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.18■□□□□ 0.5
RCCD1A6NED2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCCD1A6NED2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCCD1A6NED2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCCD1A6NED2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCCD1A6NED2 TUBB8P12-201ENST00000308911 1335 ntBASIC18.18■□□□□ 0.5
RCCD1A6NED2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 TUBB7P-202ENST00000428444 1305 ntBASIC18.18■□□□□ 0.5
RCCD1A6NED2 TUBB8P7-204ENST00000567960 1332 ntBASIC18.18■□□□□ 0.5
RCCD1A6NED2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms