Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 AC140113.3-201ENST00000605663 199 ntBASIC18.61■□□□□ 0.57
CCDC66A2RUB6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC66A2RUB6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 KRT18P48-201ENST00000434763 852 ntBASIC18.6■□□□□ 0.57
CCDC66A2RUB6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 AC004263.2-201ENST00000617183 678 ntBASIC18.6■□□□□ 0.57
CCDC66A2RUB6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 AC133561.5-201ENST00000635547 218 ntBASIC18.6■□□□□ 0.57
CCDC66A2RUB6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC66A2RUB6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 BX276092.7-203ENST00000637198 1536 ntBASIC18.59■□□□□ 0.57
CCDC66A2RUB6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 HLA-F-220ENST00000434407 884 ntBASIC18.59■□□□□ 0.57
CCDC66A2RUB6 SLC25A3P1-201ENST00000443844 931 ntBASIC18.59■□□□□ 0.57
CCDC66A2RUB6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC66A2RUB6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms