Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.67■□□□□ 0.74
SSC5DA1L4H1 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.67■□□□□ 0.74
SSC5DA1L4H1 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.67■□□□□ 0.74
SSC5DA1L4H1 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSC5DA1L4H1 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.67■□□□□ 0.74
SSC5DA1L4H1 AP001350.2-201ENST00000625104 1094 ntBASIC19.67■□□□□ 0.74
SSC5DA1L4H1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSC5DA1L4H1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSC5DA1L4H1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.67■□□□□ 0.74
SSC5DA1L4H1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SSC5DA1L4H1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSC5DA1L4H1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.67■□□□□ 0.74
SSC5DA1L4H1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSC5DA1L4H1 FRMD8P1-201ENST00000440433 1524 ntBASIC19.67■□□□□ 0.74
SSC5DA1L4H1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSC5DA1L4H1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSC5DA1L4H1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
SSC5DA1L4H1 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.67■□□□□ 0.74
SSC5DA1L4H1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSC5DA1L4H1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSC5DA1L4H1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSC5DA1L4H1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSC5DA1L4H1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.67■□□□□ 0.74
SSC5DA1L4H1 KRT8P49-201ENST00000604166 1432 ntBASIC19.67■□□□□ 0.74
SSC5DA1L4H1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 FAM220BP-201ENST00000377689 816 ntBASIC19.66■□□□□ 0.74
SSC5DA1L4H1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 AC079776.1-201ENST00000401540 1152 ntBASIC19.66■□□□□ 0.74
SSC5DA1L4H1 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 IGHV3-71-201ENST00000523324 359 ntBASIC19.66■□□□□ 0.74
SSC5DA1L4H1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.66■□□□□ 0.74
SSC5DA1L4H1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 AC087499.5-201ENST00000452760 1342 ntBASIC19.65■□□□□ 0.74
SSC5DA1L4H1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 AC104794.3-201ENST00000566840 1248 ntBASIC19.65■□□□□ 0.74
SSC5DA1L4H1 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 AL354751.1-201ENST00000412768 1863 ntBASIC19.65■□□□□ 0.74
SSC5DA1L4H1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.65■□□□□ 0.74
SSC5DA1L4H1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SSC5DA1L4H1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SSC5DA1L4H1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSC5DA1L4H1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.64■□□□□ 0.73
SSC5DA1L4H1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SSC5DA1L4H1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SSC5DA1L4H1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SSC5DA1L4H1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.64■□□□□ 0.73
SSC5DA1L4H1 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SSC5DA1L4H1 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.64■□□□□ 0.73
SSC5DA1L4H1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSC5DA1L4H1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms