Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1G3Q9Y6M4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 AL121761.2-201ENST00000598007 1648 ntBASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 SLC25A6P5-201ENST00000435663 894 ntBASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 CYMP-203ENST00000474680 1263 ntBASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 SLC25A6P2-201ENST00000497974 877 ntBASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 AC112191.1-201ENST00000523689 701 ntBASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 AC134043.2-201ENST00000624206 2238 ntBASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1G3Q9Y6M4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 AC027612.4-201ENST00000605371 583 ntBASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 AC105339.1-204ENST00000636249 355 ntBASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 AL645728.2-201ENST00000641974 660 ntBASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CSNK1G3Q9Y6M4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSNK1G3Q9Y6M4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms