Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
AP4S1Q9Y587 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 ALOX12P2-203ENST00000570921 1945 ntBASIC16.23■□□□□ 0.19
AP4S1Q9Y587 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 AC007663.1-201ENST00000438948 1240 ntBASIC16.23■□□□□ 0.19
AP4S1Q9Y587 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 AC092384.3-202ENST00000564646 2873 ntBASIC16.23■□□□□ 0.19
AP4S1Q9Y587 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4S1Q9Y587 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 KRT89P-201ENST00000620027 1478 ntBASIC16.22■□□□□ 0.19
AP4S1Q9Y587 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 EGFEM1P-202ENST00000431685 1563 ntBASIC16.22■□□□□ 0.19
AP4S1Q9Y587 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 AC128676.1-201ENST00000454392 318 ntBASIC16.22■□□□□ 0.19
AP4S1Q9Y587 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 AL391256.1-201ENST00000443260 1855 ntBASIC16.22■□□□□ 0.19
AP4S1Q9Y587 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4S1Q9Y587 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 MTHFR-217ENST00000641820 1569 ntBASIC16.21■□□□□ 0.19
AP4S1Q9Y587 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms