Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 AC211486.1-202ENST00000416371 468 ntBASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 AC004967.1-201ENST00000453589 447 ntBASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 AC211476.1-201ENST00000503899 468 ntBASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 AL078644.1-201ENST00000609881 752 ntBASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 ACTL9-202ENST00000612068 1252 ntBASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 AC134684.3-201ENST00000641758 218 ntBASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 AC079781.4-201ENST00000641908 219 ntBASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00588Q9Y4M8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
LINC00588Q9Y4M8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00588Q9Y4M8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC11.71□□□□□ -0.54
LINC00588Q9Y4M8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC11.71□□□□□ -0.54
LINC00588Q9Y4M8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC11.71□□□□□ -0.54
LINC00588Q9Y4M8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.71□□□□□ -0.54
LINC00588Q9Y4M8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
LINC00588Q9Y4M8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00588Q9Y4M8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC11.71□□□□□ -0.54
LINC00588Q9Y4M8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC11.71□□□□□ -0.54
LINC00588Q9Y4M8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00588Q9Y4M8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LINC00588Q9Y4M8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
LINC00588Q9Y4M8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 LTB4R2-202ENST00000528054 3092 ntBASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 HTR5BP-201ENST00000430851 1154 ntBASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 MIR4469-201ENST00000583919 79 ntBASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LINC00588Q9Y4M8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00588Q9Y4M8 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
LINC00588Q9Y4M8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00588Q9Y4M8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00588Q9Y4M8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00588Q9Y4M8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00588Q9Y4M8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC00588Q9Y4M8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms