Protein–RNA interactions for Protein: Q9Y324

FCF1, rRNA-processing protein FCF1 homolog, humanhuman

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1Q9Y324 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.34■□□□□ 0.37
FCF1Q9Y324 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FCF1Q9Y324 AC092053.1-201ENST00000605787 1936 ntBASIC17.34■□□□□ 0.37
FCF1Q9Y324 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FCF1Q9Y324 AC002310.6-201ENST00000624451 1377 ntBASIC17.34■□□□□ 0.37
FCF1Q9Y324 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
FCF1Q9Y324 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FCF1Q9Y324 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FCF1Q9Y324 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FCF1Q9Y324 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.33■□□□□ 0.37
FCF1Q9Y324 AC108860.2-201ENST00000562760 2183 ntBASIC17.33■□□□□ 0.37
FCF1Q9Y324 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.33■□□□□ 0.37
FCF1Q9Y324 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
FCF1Q9Y324 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
FCF1Q9Y324 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.33■□□□□ 0.37
FCF1Q9Y324 LINC02012-201ENST00000608206 1725 ntBASIC17.33■□□□□ 0.37
FCF1Q9Y324 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FCF1Q9Y324 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FCF1Q9Y324 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.33■□□□□ 0.36
FCF1Q9Y324 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.33■□□□□ 0.36
FCF1Q9Y324 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FCF1Q9Y324 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FCF1Q9Y324 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.33■□□□□ 0.36
FCF1Q9Y324 AC023274.1-201ENST00000418278 595 ntBASIC17.33■□□□□ 0.36
FCF1Q9Y324 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
FCF1Q9Y324 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.33■□□□□ 0.36
FCF1Q9Y324 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.33■□□□□ 0.36
FCF1Q9Y324 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
FCF1Q9Y324 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
FCF1Q9Y324 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.33■□□□□ 0.36
FCF1Q9Y324 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.33■□□□□ 0.36
FCF1Q9Y324 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FCF1Q9Y324 AC010507.1-201ENST00000633895 436 ntBASIC17.33■□□□□ 0.36
FCF1Q9Y324 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FCF1Q9Y324 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FCF1Q9Y324 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FCF1Q9Y324 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FCF1Q9Y324 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FCF1Q9Y324 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FCF1Q9Y324 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FCF1Q9Y324 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FCF1Q9Y324 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FCF1Q9Y324 FRMD8P1-201ENST00000440433 1524 ntBASIC17.32■□□□□ 0.36
FCF1Q9Y324 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
FCF1Q9Y324 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FCF1Q9Y324 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FCF1Q9Y324 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FCF1Q9Y324 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
FCF1Q9Y324 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FCF1Q9Y324 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FCF1Q9Y324 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FCF1Q9Y324 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FCF1Q9Y324 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.32■□□□□ 0.36
FCF1Q9Y324 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
FCF1Q9Y324 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FCF1Q9Y324 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
FCF1Q9Y324 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.32■□□□□ 0.36
FCF1Q9Y324 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
FCF1Q9Y324 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.32■□□□□ 0.36
FCF1Q9Y324 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FCF1Q9Y324 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.32■□□□□ 0.36
FCF1Q9Y324 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.32■□□□□ 0.36
FCF1Q9Y324 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.32■□□□□ 0.36
FCF1Q9Y324 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.32■□□□□ 0.36
FCF1Q9Y324 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
FCF1Q9Y324 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FCF1Q9Y324 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.32■□□□□ 0.36
FCF1Q9Y324 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
FCF1Q9Y324 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
FCF1Q9Y324 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FCF1Q9Y324 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
FCF1Q9Y324 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
FCF1Q9Y324 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FCF1Q9Y324 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FCF1Q9Y324 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FCF1Q9Y324 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FCF1Q9Y324 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FCF1Q9Y324 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FCF1Q9Y324 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FCF1Q9Y324 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FCF1Q9Y324 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FCF1Q9Y324 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.31■□□□□ 0.36
FCF1Q9Y324 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FCF1Q9Y324 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FCF1Q9Y324 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.31■□□□□ 0.36
FCF1Q9Y324 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
FCF1Q9Y324 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FCF1Q9Y324 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
FCF1Q9Y324 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC17.31■□□□□ 0.36
FCF1Q9Y324 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.31■□□□□ 0.36
FCF1Q9Y324 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.31■□□□□ 0.36
FCF1Q9Y324 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FCF1Q9Y324 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.31■□□□□ 0.36
FCF1Q9Y324 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.31■□□□□ 0.36
FCF1Q9Y324 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.31■□□□□ 0.36
FCF1Q9Y324 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
FCF1Q9Y324 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FCF1Q9Y324 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.31■□□□□ 0.36
FCF1Q9Y324 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FCF1Q9Y324 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms