Protein–RNA interactions for Protein: Q9UQL6

HDAC5, Histone deacetylase 5, humanhuman

Predictions only

Length 1,122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5Q9UQL6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.33■■□□□ 1.01
HDAC5Q9UQL6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.33■■□□□ 1.01
HDAC5Q9UQL6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HDAC5Q9UQL6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.33■■□□□ 1.01
HDAC5Q9UQL6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HDAC5Q9UQL6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC21.33■■□□□ 1
HDAC5Q9UQL6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HDAC5Q9UQL6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
HDAC5Q9UQL6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.32■■□□□ 1
HDAC5Q9UQL6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.32■■□□□ 1
HDAC5Q9UQL6 AC139713.2-201ENST00000641328 2723 ntBASIC21.32■■□□□ 1
HDAC5Q9UQL6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.32■■□□□ 1
HDAC5Q9UQL6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.32■■□□□ 1
HDAC5Q9UQL6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HDAC5Q9UQL6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.32■■□□□ 1
HDAC5Q9UQL6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC21.32■■□□□ 1
HDAC5Q9UQL6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HDAC5Q9UQL6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.32■■□□□ 1
HDAC5Q9UQL6 MED15P5-201ENST00000423150 992 ntBASIC21.32■■□□□ 1
HDAC5Q9UQL6 KRT18P3-201ENST00000451602 1288 ntBASIC21.32■■□□□ 1
HDAC5Q9UQL6 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.32■■□□□ 1
HDAC5Q9UQL6 SLC25A6P2-201ENST00000497974 877 ntBASIC21.32■■□□□ 1
HDAC5Q9UQL6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.32■■□□□ 1
HDAC5Q9UQL6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC21.32■■□□□ 1
HDAC5Q9UQL6 AC096734.2-201ENST00000562054 433 ntBASIC21.32■■□□□ 1
HDAC5Q9UQL6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.32■■□□□ 1
HDAC5Q9UQL6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC21.32■■□□□ 1
HDAC5Q9UQL6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.32■■□□□ 1
HDAC5Q9UQL6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HDAC5Q9UQL6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
HDAC5Q9UQL6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC21.32■■□□□ 1
HDAC5Q9UQL6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.32■■□□□ 1
HDAC5Q9UQL6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.32■■□□□ 1
HDAC5Q9UQL6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
HDAC5Q9UQL6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HDAC5Q9UQL6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC21.32■■□□□ 1
HDAC5Q9UQL6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.32■■□□□ 1
HDAC5Q9UQL6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC21.32■■□□□ 1
HDAC5Q9UQL6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HDAC5Q9UQL6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HDAC5Q9UQL6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC21.31■■□□□ 1
HDAC5Q9UQL6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
HDAC5Q9UQL6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.31■■□□□ 1
HDAC5Q9UQL6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HDAC5Q9UQL6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.31■■□□□ 1
HDAC5Q9UQL6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HDAC5Q9UQL6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HDAC5Q9UQL6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HDAC5Q9UQL6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
HDAC5Q9UQL6 FAM185BP-201ENST00000443595 716 ntBASIC21.31■■□□□ 1
HDAC5Q9UQL6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.31■■□□□ 1
HDAC5Q9UQL6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
HDAC5Q9UQL6 CXCL1P1-201ENST00000502804 216 ntBASIC21.31■■□□□ 1
HDAC5Q9UQL6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.31■■□□□ 1
HDAC5Q9UQL6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
HDAC5Q9UQL6 OR7E47P-204ENST00000575924 449 ntBASIC21.31■■□□□ 1
HDAC5Q9UQL6 AC005412.3-201ENST00000580309 715 ntBASIC21.31■■□□□ 1
HDAC5Q9UQL6 AC064836.3-201ENST00000607928 673 ntBASIC21.31■■□□□ 1
HDAC5Q9UQL6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
HDAC5Q9UQL6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
HDAC5Q9UQL6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HDAC5Q9UQL6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
HDAC5Q9UQL6 TOP3BP1-201ENST00000420768 1380 ntBASIC21.31■■□□□ 1
HDAC5Q9UQL6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC21.31■■□□□ 1
HDAC5Q9UQL6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HDAC5Q9UQL6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC21.31■■□□□ 1
HDAC5Q9UQL6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.31■■□□□ 1
HDAC5Q9UQL6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
HDAC5Q9UQL6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
HDAC5Q9UQL6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC21.31■■□□□ 1
HDAC5Q9UQL6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
HDAC5Q9UQL6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
HDAC5Q9UQL6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC21.3■■□□□ 1
HDAC5Q9UQL6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HDAC5Q9UQL6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.3■■□□□ 1
HDAC5Q9UQL6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.3■■□□□ 1
HDAC5Q9UQL6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.3■■□□□ 1
HDAC5Q9UQL6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
HDAC5Q9UQL6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.3■■□□□ 1
HDAC5Q9UQL6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HDAC5Q9UQL6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HDAC5Q9UQL6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HDAC5Q9UQL6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
HDAC5Q9UQL6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
HDAC5Q9UQL6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HDAC5Q9UQL6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC21.3■■□□□ 1
HDAC5Q9UQL6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.3■■□□□ 1
HDAC5Q9UQL6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HDAC5Q9UQL6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
HDAC5Q9UQL6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21.3■■□□□ 1
HDAC5Q9UQL6 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.3■■□□□ 1
HDAC5Q9UQL6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.3■■□□□ 1
HDAC5Q9UQL6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC21.3■■□□□ 1
HDAC5Q9UQL6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
HDAC5Q9UQL6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.3■■□□□ 1
HDAC5Q9UQL6 REXO1L3P-201ENST00000622202 1288 ntBASIC21.3■■□□□ 1
HDAC5Q9UQL6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.3■■□□□ 1
HDAC5Q9UQL6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
HDAC5Q9UQL6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
HDAC5Q9UQL6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms