Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 INE1-201ENST00000456273 945 ntBASIC21.55■■□□□ 1.04
CCNL1Q9UK58 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 AC073389.1-201ENST00000595595 795 ntBASIC21.55■■□□□ 1.04
CCNL1Q9UK58 AC017083.2-201ENST00000608069 979 ntBASIC21.55■■□□□ 1.04
CCNL1Q9UK58 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 LINC00304-203ENST00000565008 1864 ntBASIC21.55■■□□□ 1.04
CCNL1Q9UK58 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNL1Q9UK58 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 PP14571-201ENST00000404327 934 ntTSL 2 BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 PRR29-204ENST00000577953 565 ntTSL 4 BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 AC004840.1-201ENST00000636359 365 ntBASIC21.54■■□□□ 1.04
CCNL1Q9UK58 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CCNL1Q9UK58 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 DGCR5-201ENST00000399539 862 ntBASIC21.53■■□□□ 1.04
CCNL1Q9UK58 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 RNA5-8SN1-201ENST00000610460 153 ntBASIC21.53■■□□□ 1.04
CCNL1Q9UK58 RNA5-8SN5-202ENST00000612463 153 ntBASIC21.53■■□□□ 1.04
CCNL1Q9UK58 RNA5-8SN4-201ENST00000613359 153 ntBASIC21.53■■□□□ 1.04
CCNL1Q9UK58 RNA5-8SN5-201ENST00000619471 153 ntBASIC21.53■■□□□ 1.04
CCNL1Q9UK58 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CCNL1Q9UK58 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCNL1Q9UK58 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CCNL1Q9UK58 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNL1Q9UK58 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
CCNL1Q9UK58 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC21.52■■□□□ 1.04
CCNL1Q9UK58 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CCNL1Q9UK58 AL035456.1-201ENST00000456064 1369 ntBASIC21.52■■□□□ 1.04
CCNL1Q9UK58 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCNL1Q9UK58 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC21.52■■□□□ 1.04
CCNL1Q9UK58 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC21.52■■□□□ 1.04
CCNL1Q9UK58 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC21.52■■□□□ 1.04
CCNL1Q9UK58 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CCNL1Q9UK58 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNL1Q9UK58 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
CCNL1Q9UK58 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC21.52■■□□□ 1.04
CCNL1Q9UK58 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC21.52■■□□□ 1.04
CCNL1Q9UK58 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC21.52■■□□□ 1.04
CCNL1Q9UK58 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CCNL1Q9UK58 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms