Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP25Q9UHP3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP25Q9UHP3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
USP25Q9UHP3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.68■□□□□ 0.74
USP25Q9UHP3 AL845331.1-201ENST00000424978 1190 ntBASIC19.68■□□□□ 0.74
USP25Q9UHP3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.68■□□□□ 0.74
USP25Q9UHP3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.68■□□□□ 0.74
USP25Q9UHP3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP25Q9UHP3 AC109462.3-201ENST00000573934 613 ntBASIC19.68■□□□□ 0.74
USP25Q9UHP3 AC005336.2-201ENST00000593183 939 ntBASIC19.68■□□□□ 0.74
USP25Q9UHP3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.68■□□□□ 0.74
USP25Q9UHP3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP25Q9UHP3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP25Q9UHP3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP25Q9UHP3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP25Q9UHP3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
USP25Q9UHP3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP25Q9UHP3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.68■□□□□ 0.74
USP25Q9UHP3 AC092068.3-201ENST00000587894 2016 ntBASIC19.68■□□□□ 0.74
USP25Q9UHP3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP25Q9UHP3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
USP25Q9UHP3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP25Q9UHP3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP25Q9UHP3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.68■□□□□ 0.74
USP25Q9UHP3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP25Q9UHP3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.67■□□□□ 0.74
USP25Q9UHP3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.67■□□□□ 0.74
USP25Q9UHP3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP25Q9UHP3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP25Q9UHP3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP25Q9UHP3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP25Q9UHP3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.67■□□□□ 0.74
USP25Q9UHP3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP25Q9UHP3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP25Q9UHP3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP25Q9UHP3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP25Q9UHP3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP25Q9UHP3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.67■□□□□ 0.74
USP25Q9UHP3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP25Q9UHP3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.67■□□□□ 0.74
USP25Q9UHP3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP25Q9UHP3 FAM220CP-201ENST00000395253 831 ntBASIC19.67■□□□□ 0.74
USP25Q9UHP3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.67■□□□□ 0.74
USP25Q9UHP3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.67■□□□□ 0.74
USP25Q9UHP3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.67■□□□□ 0.74
USP25Q9UHP3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
USP25Q9UHP3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.67■□□□□ 0.74
USP25Q9UHP3 AL121956.5-201ENST00000625261 221 ntBASIC19.67■□□□□ 0.74
USP25Q9UHP3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.67■□□□□ 0.74
USP25Q9UHP3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP25Q9UHP3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP25Q9UHP3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP25Q9UHP3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP25Q9UHP3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.67■□□□□ 0.74
USP25Q9UHP3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
USP25Q9UHP3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
USP25Q9UHP3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
USP25Q9UHP3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP25Q9UHP3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP25Q9UHP3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP25Q9UHP3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP25Q9UHP3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
USP25Q9UHP3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
USP25Q9UHP3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP25Q9UHP3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP25Q9UHP3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP25Q9UHP3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP25Q9UHP3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
USP25Q9UHP3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.66■□□□□ 0.74
USP25Q9UHP3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP25Q9UHP3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.66■□□□□ 0.74
USP25Q9UHP3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP25Q9UHP3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.66■□□□□ 0.74
USP25Q9UHP3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.66■□□□□ 0.74
USP25Q9UHP3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP25Q9UHP3 AC111152.3-201ENST00000569699 673 ntBASIC19.66■□□□□ 0.74
USP25Q9UHP3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.66■□□□□ 0.74
USP25Q9UHP3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP25Q9UHP3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP25Q9UHP3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP25Q9UHP3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.66■□□□□ 0.74
USP25Q9UHP3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP25Q9UHP3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP25Q9UHP3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP25Q9UHP3 AC103702.1-201ENST00000548801 2630 ntBASIC19.66■□□□□ 0.74
USP25Q9UHP3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
USP25Q9UHP3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
USP25Q9UHP3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP25Q9UHP3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.66■□□□□ 0.74
USP25Q9UHP3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.66■□□□□ 0.74
USP25Q9UHP3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP25Q9UHP3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.66■□□□□ 0.74
USP25Q9UHP3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
USP25Q9UHP3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 LINC02012-201ENST00000608206 1725 ntBASIC19.65■□□□□ 0.74
USP25Q9UHP3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP25Q9UHP3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
USP25Q9UHP3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
USP25Q9UHP3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms