Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRFN1Q9P244 NOC2LP1-202ENST00000452600 2235 ntBASIC15.72■□□□□ 0.11
LRFN1Q9P244 AC008764.6-201ENST00000595909 2069 ntBASIC15.72■□□□□ 0.11
LRFN1Q9P244 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
LRFN1Q9P244 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.72■□□□□ 0.11
LRFN1Q9P244 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LRFN1Q9P244 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRFN1Q9P244 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRFN1Q9P244 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRFN1Q9P244 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRFN1Q9P244 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRFN1Q9P244 AC025580.3-201ENST00000617932 1424 ntBASIC15.72■□□□□ 0.11
LRFN1Q9P244 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.72■□□□□ 0.11
LRFN1Q9P244 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRFN1Q9P244 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
LRFN1Q9P244 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRFN1Q9P244 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.72■□□□□ 0.11
LRFN1Q9P244 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.72■□□□□ 0.11
LRFN1Q9P244 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.72■□□□□ 0.11
LRFN1Q9P244 KRT19P2-202ENST00000557173 1012 ntBASIC15.72■□□□□ 0.11
LRFN1Q9P244 PDPK2P-202ENST00000562415 1191 ntBASIC15.72■□□□□ 0.11
LRFN1Q9P244 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRFN1Q9P244 C20orf181-201ENST00000623918 480 ntBASIC15.72■□□□□ 0.11
LRFN1Q9P244 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRFN1Q9P244 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRFN1Q9P244 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRFN1Q9P244 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.72■□□□□ 0.11
LRFN1Q9P244 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRFN1Q9P244 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.72■□□□□ 0.11
LRFN1Q9P244 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LRFN1Q9P244 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRFN1Q9P244 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRFN1Q9P244 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRFN1Q9P244 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRFN1Q9P244 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.71■□□□□ 0.11
LRFN1Q9P244 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
LRFN1Q9P244 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.71■□□□□ 0.11
LRFN1Q9P244 AC018470.1-201ENST00000624790 3129 ntBASIC15.71■□□□□ 0.11
LRFN1Q9P244 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRFN1Q9P244 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRFN1Q9P244 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRFN1Q9P244 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRFN1Q9P244 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRFN1Q9P244 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
LRFN1Q9P244 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.71■□□□□ 0.11
LRFN1Q9P244 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.71■□□□□ 0.11
LRFN1Q9P244 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.71■□□□□ 0.11
LRFN1Q9P244 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.71■□□□□ 0.11
LRFN1Q9P244 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.71■□□□□ 0.11
LRFN1Q9P244 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
LRFN1Q9P244 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRFN1Q9P244 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRFN1Q9P244 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRFN1Q9P244 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRFN1Q9P244 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRFN1Q9P244 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.71■□□□□ 0.11
LRFN1Q9P244 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LRFN1Q9P244 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.7■□□□□ 0.1
LRFN1Q9P244 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.7■□□□□ 0.1
LRFN1Q9P244 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LRFN1Q9P244 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LRFN1Q9P244 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
LRFN1Q9P244 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.7■□□□□ 0.1
LRFN1Q9P244 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LRFN1Q9P244 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LRFN1Q9P244 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LRFN1Q9P244 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
LRFN1Q9P244 AC087163.2-201ENST00000457299 853 ntBASIC15.7■□□□□ 0.1
LRFN1Q9P244 ALG1L5P-201ENST00000482043 771 ntBASIC15.7■□□□□ 0.1
LRFN1Q9P244 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.7■□□□□ 0.1
LRFN1Q9P244 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.7■□□□□ 0.1
LRFN1Q9P244 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.7■□□□□ 0.1
LRFN1Q9P244 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
LRFN1Q9P244 AP001160.2-201ENST00000596071 487 ntBASIC15.7■□□□□ 0.1
LRFN1Q9P244 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.7■□□□□ 0.1
LRFN1Q9P244 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRFN1Q9P244 AC129492.6-201ENST00000611383 1305 ntBASIC15.69■□□□□ 0.1
LRFN1Q9P244 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LRFN1Q9P244 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms