Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 ACTL9-202ENST00000612068 1252 ntBASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
HMG20BQ9P0W2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 MTDHP5-201ENST00000598980 586 ntBASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
HMG20BQ9P0W2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 BCAR1-209ENST00000546196 1340 ntBASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 AC093525.9-201ENST00000624961 1746 ntBASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 DNAJB3-201ENST00000446806 729 ntBASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 KRT19P2-202ENST00000557173 1012 ntBASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 AC025580.3-201ENST00000617932 1424 ntBASIC20.78■□□□□ 0.92
HMG20BQ9P0W2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 EGFEM1P-202ENST00000431685 1563 ntBASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 AC107918.2-201ENST00000530817 355 ntBASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
HMG20BQ9P0W2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms