Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
CDC42SE1Q9NRR8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 AC097381.1-201ENST00000429019 1296 ntBASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 AC112777.1-201ENST00000540175 1423 ntBASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CDC42SE1Q9NRR8 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 LCK-206ENST00000373564 2137 ntTSL 5 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CDC42SE1Q9NRR8 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms