Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 KRT18P6-201ENST00000555540 1265 ntBASIC20.31■□□□□ 0.84
RTN4Q9NQC3 AC026271.3-201ENST00000571884 352 ntBASIC20.31■□□□□ 0.84
RTN4Q9NQC3 AC073648.6-201ENST00000641589 218 ntBASIC20.31■□□□□ 0.84
RTN4Q9NQC3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTN4Q9NQC3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 AC011506.1-201ENST00000474329 610 ntBASIC20.3■□□□□ 0.84
RTN4Q9NQC3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 AC008622.2-201ENST00000617006 1229 ntBASIC20.3■□□□□ 0.84
RTN4Q9NQC3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 AL031985.4-201ENST00000642138 673 ntBASIC20.3■□□□□ 0.84
RTN4Q9NQC3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 AC023908.3-201ENST00000564211 3047 ntBASIC20.3■□□□□ 0.84
RTN4Q9NQC3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTN4Q9NQC3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 ID1-201ENST00000376105 1233 ntBASIC20.29■□□□□ 0.84
RTN4Q9NQC3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 CR392000.1-201ENST00000624770 1228 ntBASIC20.29■□□□□ 0.84
RTN4Q9NQC3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RTN4Q9NQC3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 AL096828.2-201ENST00000567259 1965 ntBASIC20.28■□□□□ 0.84
RTN4Q9NQC3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 AC026748.1-201ENST00000624349 3251 ntBASIC20.28■□□□□ 0.84
RTN4Q9NQC3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTN4Q9NQC3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms