Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MRM3Q9HC36 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MRM3Q9HC36 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MRM3Q9HC36 AC243591.1-201ENST00000452967 1364 ntBASIC17.13■□□□□ 0.33
MRM3Q9HC36 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MRM3Q9HC36 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MRM3Q9HC36 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MRM3Q9HC36 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MRM3Q9HC36 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
MRM3Q9HC36 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
MRM3Q9HC36 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
MRM3Q9HC36 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.12■□□□□ 0.33
MRM3Q9HC36 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
MRM3Q9HC36 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MRM3Q9HC36 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.12■□□□□ 0.33
MRM3Q9HC36 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.12■□□□□ 0.33
MRM3Q9HC36 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
MRM3Q9HC36 AC091304.2-201ENST00000564639 760 ntBASIC17.12■□□□□ 0.33
MRM3Q9HC36 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.12■□□□□ 0.33
MRM3Q9HC36 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 REXO1L6P-202ENST00000619970 1078 ntBASIC17.12■□□□□ 0.33
MRM3Q9HC36 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.12■□□□□ 0.33
MRM3Q9HC36 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.12■□□□□ 0.33
MRM3Q9HC36 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
MRM3Q9HC36 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
MRM3Q9HC36 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
MRM3Q9HC36 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MRM3Q9HC36 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MRM3Q9HC36 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
MRM3Q9HC36 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MRM3Q9HC36 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MRM3Q9HC36 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MRM3Q9HC36 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.11■□□□□ 0.33
MRM3Q9HC36 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MRM3Q9HC36 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MRM3Q9HC36 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MRM3Q9HC36 LINC00895-201ENST00000629028 1637 ntBASIC17.11■□□□□ 0.33
MRM3Q9HC36 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
MRM3Q9HC36 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MRM3Q9HC36 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MRM3Q9HC36 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MRM3Q9HC36 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MRM3Q9HC36 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MRM3Q9HC36 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MRM3Q9HC36 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.11■□□□□ 0.33
MRM3Q9HC36 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MRM3Q9HC36 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.11■□□□□ 0.33
MRM3Q9HC36 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.11■□□□□ 0.33
MRM3Q9HC36 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MRM3Q9HC36 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.11■□□□□ 0.33
MRM3Q9HC36 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
MRM3Q9HC36 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MRM3Q9HC36 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.11■□□□□ 0.33
MRM3Q9HC36 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.11■□□□□ 0.33
MRM3Q9HC36 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.11■□□□□ 0.33
MRM3Q9HC36 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MRM3Q9HC36 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MRM3Q9HC36 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.11■□□□□ 0.33
MRM3Q9HC36 AC008608.2-201ENST00000606089 416 ntBASIC17.11■□□□□ 0.33
MRM3Q9HC36 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.11■□□□□ 0.33
MRM3Q9HC36 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MRM3Q9HC36 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
MRM3Q9HC36 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MRM3Q9HC36 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MRM3Q9HC36 KRT8P49-201ENST00000604166 1432 ntBASIC17.11■□□□□ 0.33
MRM3Q9HC36 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
MRM3Q9HC36 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.11■□□□□ 0.33
MRM3Q9HC36 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.11■□□□□ 0.33
MRM3Q9HC36 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MRM3Q9HC36 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.11■□□□□ 0.33
MRM3Q9HC36 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.11■□□□□ 0.33
MRM3Q9HC36 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
MRM3Q9HC36 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MRM3Q9HC36 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MRM3Q9HC36 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.1■□□□□ 0.33
MRM3Q9HC36 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.1■□□□□ 0.33
MRM3Q9HC36 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms