Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 PCDHB17P-201ENST00000539533 2393 ntBASIC21.08■□□□□ 0.97
UPF2Q9HAU5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 AC109462.3-201ENST00000573934 613 ntBASIC21.08■□□□□ 0.97
UPF2Q9HAU5 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.08■□□□□ 0.97
UPF2Q9HAU5 AL023973.1-201ENST00000624619 620 ntBASIC21.08■□□□□ 0.97
UPF2Q9HAU5 AL031432.5-201ENST00000641059 760 ntBASIC21.08■□□□□ 0.97
UPF2Q9HAU5 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
UPF2Q9HAU5 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC21.08■□□□□ 0.96
UPF2Q9HAU5 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.08■□□□□ 0.96
UPF2Q9HAU5 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
UPF2Q9HAU5 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
UPF2Q9HAU5 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
UPF2Q9HAU5 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
UPF2Q9HAU5 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC21.08■□□□□ 0.96
UPF2Q9HAU5 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
UPF2Q9HAU5 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 GPR32P1-201ENST00000601788 811 ntBASIC21.07■□□□□ 0.96
UPF2Q9HAU5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 LINC01568-207ENST00000641790 1380 ntBASIC21.07■□□□□ 0.96
UPF2Q9HAU5 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
UPF2Q9HAU5 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 ABR-203ENST00000536794 2213 ntTSL 2 BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 STX3-203ENST00000529177 1571 ntTSL 2 BASIC21.06■□□□□ 0.96
UPF2Q9HAU5 AL513523.2-202ENST00000427283 2040 ntBASIC21.05■□□□□ 0.96
UPF2Q9HAU5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 KRT18P22-201ENST00000402024 1347 ntBASIC21.05■□□□□ 0.96
UPF2Q9HAU5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC21.05■□□□□ 0.96
UPF2Q9HAU5 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms