Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF41Q9H4P4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.16■□□□□ 0.82
RNF41Q9H4P4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF41Q9H4P4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF41Q9H4P4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RNF41Q9H4P4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
RNF41Q9H4P4 AL591424.1-201ENST00000442569 1213 ntBASIC20.16■□□□□ 0.82
RNF41Q9H4P4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF41Q9H4P4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF41Q9H4P4 AC027601.4-201ENST00000611259 610 ntBASIC20.16■□□□□ 0.82
RNF41Q9H4P4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.16■□□□□ 0.82
RNF41Q9H4P4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF41Q9H4P4 AL021920.2-201ENST00000624828 1351 ntBASIC20.16■□□□□ 0.82
RNF41Q9H4P4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RNF41Q9H4P4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF41Q9H4P4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF41Q9H4P4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF41Q9H4P4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF41Q9H4P4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.16■□□□□ 0.82
RNF41Q9H4P4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF41Q9H4P4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF41Q9H4P4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF41Q9H4P4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.15■□□□□ 0.82
RNF41Q9H4P4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
RNF41Q9H4P4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RNF41Q9H4P4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
RNF41Q9H4P4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 AP001094.4-201ENST00000579008 2176 ntBASIC20.14■□□□□ 0.81
RNF41Q9H4P4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 DUX4L17-201ENST00000557360 1267 ntBASIC20.14■□□□□ 0.81
RNF41Q9H4P4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 FAM197Y3-203ENST00000618346 717 ntBASIC20.14■□□□□ 0.81
RNF41Q9H4P4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF41Q9H4P4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF41Q9H4P4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF41Q9H4P4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF41Q9H4P4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF41Q9H4P4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF41Q9H4P4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF41Q9H4P4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF41Q9H4P4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF41Q9H4P4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF41Q9H4P4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF41Q9H4P4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RNF41Q9H4P4 TUBB8P12-201ENST00000308911 1335 ntBASIC20.13■□□□□ 0.81
RNF41Q9H4P4 TUBB7P-202ENST00000428444 1305 ntBASIC20.13■□□□□ 0.81
RNF41Q9H4P4 TUBB8P7-204ENST00000567960 1332 ntBASIC20.13■□□□□ 0.81
RNF41Q9H4P4 AC026471.1-201ENST00000564629 3026 ntBASIC20.13■□□□□ 0.81
RNF41Q9H4P4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF41Q9H4P4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF41Q9H4P4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms