Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 BX005266.1-201ENST00000473402 457 ntBASIC15.3■□□□□ 0.04
NELFAQ9H3P2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 AP002469.2-201ENST00000531724 424 ntBASIC15.3■□□□□ 0.04
NELFAQ9H3P2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 AC004817.3-201ENST00000602957 2129 ntBASIC15.3■□□□□ 0.04
NELFAQ9H3P2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.3■□□□□ 0.04
NELFAQ9H3P2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 AL020989.1-201ENST00000422979 469 ntBASIC15.29■□□□□ 0.04
NELFAQ9H3P2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 AL160237.2-201ENST00000556165 472 ntBASIC15.29■□□□□ 0.04
NELFAQ9H3P2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.29■□□□□ 0.04
NELFAQ9H3P2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NELFAQ9H3P2 AL135999.2-201ENST00000622438 1686 ntBASIC15.28■□□□□ 0.04
NELFAQ9H3P2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.28■□□□□ 0.04
NELFAQ9H3P2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms