Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 RPS15P9-201ENST00000494093 319 ntBASIC18.04■□□□□ 0.48
LHX5Q9H2C1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 AC012640.2-201ENST00000561606 901 ntBASIC18.04■□□□□ 0.48
LHX5Q9H2C1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 PGM5P2-202ENST00000637225 1043 ntBASIC18.04■□□□□ 0.48
LHX5Q9H2C1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LHX5Q9H2C1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 AL356488.2-201ENST00000602755 427 ntBASIC18.03■□□□□ 0.48
LHX5Q9H2C1 AC008667.4-201ENST00000607370 168 ntBASIC18.03■□□□□ 0.48
LHX5Q9H2C1 GGTLC5P-201ENST00000617623 998 ntBASIC18.03■□□□□ 0.48
LHX5Q9H2C1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 PI4KAP1-204ENST00000612579 1703 ntBASIC18.03■□□□□ 0.48
LHX5Q9H2C1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 AC106886.4-201ENST00000623557 2502 ntBASIC18.03■□□□□ 0.48
LHX5Q9H2C1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LHX5Q9H2C1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LHX5Q9H2C1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LHX5Q9H2C1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.02■□□□□ 0.48
LHX5Q9H2C1 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LHX5Q9H2C1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LHX5Q9H2C1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LHX5Q9H2C1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LHX5Q9H2C1 AC009053.2-201ENST00000563701 2365 ntBASIC18.02■□□□□ 0.48
LHX5Q9H2C1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
LHX5Q9H2C1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.02■□□□□ 0.48
LHX5Q9H2C1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LHX5Q9H2C1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LHX5Q9H2C1 AC087163.2-201ENST00000457299 853 ntBASIC18.02■□□□□ 0.48
LHX5Q9H2C1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LHX5Q9H2C1 AP002490.2-201ENST00000524791 560 ntBASIC18.02■□□□□ 0.48
LHX5Q9H2C1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LHX5Q9H2C1 KRT8P49-201ENST00000604166 1432 ntBASIC18.02■□□□□ 0.48
LHX5Q9H2C1 AC023511.2-201ENST00000618803 211 ntBASIC18.02■□□□□ 0.48
LHX5Q9H2C1 MIR1199-201ENST00000621445 119 ntBASIC18.02■□□□□ 0.48
LHX5Q9H2C1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
LHX5Q9H2C1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LHX5Q9H2C1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LHX5Q9H2C1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LHX5Q9H2C1 PCDHB17P-201ENST00000539533 2393 ntBASIC18.02■□□□□ 0.47
LHX5Q9H2C1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LHX5Q9H2C1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LHX5Q9H2C1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms